Evidence map›Paper›PMID 29088370›Full record

ArticleFEMS microbiology letters2017

Antibiotic treatment disrupts bacterial communities in the colon and rectum of simian immunodeficiency virus-infected macaques.

Alexander S Zevin, Tiffany Hensley-McBain, Charlene Miller, Elise Smith, Stanley Langevin, Nichole R Klatt

Open access · bronzeAbstract read
In one paragraph

Article in FEMS microbiology letters, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Alexander S ZevinDepartment of Pharmaceutics, Washington National Primate Research Center, University of Washington, Seattle, WA 98121, USA.
Tiffany Hensley-McBainDepartment of Pharmaceutics, Washington National Primate Research Center, University of Washington, Seattle, WA 98121, USA.
Charlene MillerDepartment of Pharmaceutics, Washington National Primate Research Center, University of Washington, Seattle, WA 98121, USA.
Elise SmithWashington National Primate Research Center, University of Washington, Seattle, WA 98121, USA.
Stanley LangevinWashington National Primate Research Center, University of Washington, Seattle, WA 98121, USA.
Nichole R KlattDepartment of Pharmaceutics, Washington National Primate Research Center, University of Washington, Seattle, WA 98121, USA.
University of Washington · US

Funding

Washington National Primate Research CenterP51OD010425 · OD · UNIVERSITY OF WASHINGTON · PI Mari Ostendorf · 2012 to 2026
$201.8M
Diseases of Public Health Importance Training GrantT32AI007509 · NIAID · UNIVERSITY OF WASHINGTON · PI LUND, JENNIFER M · 1997 to 2024
$6.3M
Mucosal Immune Dysfunction after SIV InfectionK22AI098440 · NIAID · UNIVERSITY OF WASHINGTON · PI KLATT, NICHOLE ROSE · 2013 to 2014
$270k
NIAID NIH HHS K22 AI098440NIAID NIH HHS T32 AI007509NIH HHS P51 OD010425
6 · The paper itself

Abstract

Antibiotic therapies are known to disrupt gastrointestinal (GI) bacterial communities. HIV and pathogenic simian immunodeficiency virus (SIV) infections have also been associated with disrupted GI bacterial communities. We administered a combination antibiotic therapy to six SIV-infected rhesus macaques and collected colon biopsies, stool samples and rectal swabs before and after antibiotics, and evaluated the bacterial communities at each sample site using high-throughput 16S rRNA gene sequencing. The colon mucosa and stool samples displayed different bacterial communities, while the rectal swabs showed a mixture of the mucosal and stool-associated bacteria. Antibiotics disrupted the native bacterial communities at each sample site. The colon mucosa showed depleted abundances of the dominant Helicobacteraceae, while we found depleted abundances of the dominant Ruminococcaceae sp. in the stool. The rectal swabs showed similar trends as the colon mucosa, but were more variable. After the antibiotic treatment, there were increased abundances of similar taxa of facultative anaerobic bacteria, including Lactobacillaceae and Enterobacteriaceae at each sample site.

Indexed as

AnimalsAnti-Bacterial AgentsBacterial LoadColonFecesGastrointestinal MicrobiomeMacaca mulattaMaleRectumSimian Acquired Immunodeficiency SyndromeAnti-Bacterial AgentsantibioticsHIVmacaquemicrobiomerectal swabSIV

Identifiers

PMID29088370
PMCPMC5827625
OpenAlexW2766459942

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.