Evidence map›Paper›PMID 29087947›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Testing the neutral hypothesis of phenotypic evolution.

Wei-Chin Ho, Yoshikazu Ohya, Jianzhi Zhang

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  9. Patterns and evolutionary consequences of pleiotropy.Annual review of ecology, evolution, and systematics · 2023
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  17. Caution in testing phenotypic selection.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  18. Reply to Zhang and Xu: Environment is indeed important in any phenotypic study.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  19. Fly wing evolution explained by a neutral model with mutational pleiotropy.Evolution; international journal of organic evolution · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Wei-Chin HoDepartment of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI 48109.
Yoshikazu OhyaDepartment of Integrated Biosciences, Graduate School of Frontier Sciences, University of Tokyo, Kashiwa, Chiba Prefecture 277-8562, Japan.
Jianzhi ZhangDepartment of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI 48109; jianzhi@umich.edu.ORCID 0000-0001-6141-1290

Funding

Pleiotropy: patterns, mechanisms, and evolutionary consequencesR01GM103232 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ZHANG, JIANZHI · 2013 to 2020
$1.8M
NIGMS NIH HHS R01 GM103232
6 · The paper itself

Abstract

Although evolution by natural selection is widely regarded as the most important principle of biology, it is unknown whether phenotypic variations within and between species are mostly adaptive or neutral due to the lack of relevant studies of large, unbiased samples of phenotypic traits. Here, we examine 210 yeast morphological traits chosen because of experimental feasibility irrespective of their potential adaptive values. Our analysis is based on the premise that, under neutrality, the rate of phenotypic evolution measured in the unit of mutational size declines as the trait becomes more important to fitness, analogous to the neutral paradigm that functional genes evolve more slowly than functionless pseudogenes. However, we find faster evolution of more important morphological traits within and between species, rejecting the neutral hypothesis. By contrast, an analysis of 3,466 gene expression traits fails to refute neutrality. Thus, at least in yeast, morphological evolution appears largely adaptive, but the same may not apply to other classes of phenotypes. Our neutrality test is applicable to other species, especially genetic model organisms, for which estimations of mutational size and trait importance are relatively straightforward.

Indexed as

Biological EvolutionGenes, FungalModels, GeneticMutationPhenotypeAdaptation, BiologicalGenetic VariationPrincipal Component AnalysisSaccharomyces cerevisiaeSelection, GeneticTime Factorsadaptationgene expressionmorphologyneutralityyeast

Identifiers

PMID29087947
PMCPMC5699056

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.