Evidence map›Paper›PMID 29087381›Full record

ArticleScientific data2017

The cell-type specific transcriptome in human adipose tissue and influence of obesity on adipocyte progenitors.

Anna Ehrlund, Juan R Acosta, Christel Björk, Per Hedén, Iyadh Douagi, Peter Arner, Jurga Laurencikiene

Open access · goldAbstract readDataset
In one paragraph

Article in Scientific data, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 48 citations in OpenAlex.

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  20. Fibroblast activation protein restrains adipogenic differentiation and regulates matrix-mediated mTOR signaling.Matrix biology : journal of the International Society for Matrix Biology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Anna EhrlundLipid Laboratory, Department of Medicine Huddinge, Karolinska Institutet, Stockholm SE-14186, Sweden.
Juan R AcostaLipid Laboratory, Department of Medicine Huddinge, Karolinska Institutet, Stockholm SE-14186, Sweden.
Christel BjörkLipid Laboratory, Department of Medicine Huddinge, Karolinska Institutet, Stockholm SE-14186, Sweden.
Per HedénAkademikliniken, Storängsvägen 10, Stockholm SE-115 42, Sweden.
Iyadh DouagiCenter for Hematology and Regenerative Medicine (HERM), Department of Medicine Huddinge, Karolinska Institutet, Stockholm SE-14186, Sweden.
Peter ArnerLipid Laboratory, Department of Medicine Huddinge, Karolinska Institutet, Stockholm SE-14186, Sweden.
Jurga LaurencikieneLipid Laboratory, Department of Medicine Huddinge, Karolinska Institutet, Stockholm SE-14186, Sweden.
Karolinska Institutet · SEAkademikliniken · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Obesity affects gene expression and metabolism of white adipose tissue (WAT), which results in insulin resistance (IR) and type 2 diabetes. However, WAT is a heterogeneous organ containing many cell types that might respond differently to obesity-induced changes. We performed flow cytometry sorting and RNA expression profiling by microarray of major WAT cell types (adipocytes, CD45-/CD31-/CD34+ progenitors, CD45+/CD14+ monocytes/ macrophages, CD45+/CD14- leukocytes), which allowed us to identify genes enriched in specific cell fractions. Additionally, we included adipocytes and adipocyte progenitor cells obtained from lean and obese individuals. Taken together, we provide a detailed gene expression atlas of major human adipose tissue resident cell types for clinical/basic research and using this dataset provide lists of cell-type specific genes that are of interest for metabolic research.

Indexed as

AdipocytesStem CellsTranscriptomeAdipose TissueHumansObesityOrgan Specificity

Identifiers

PMID29087381
PMCPMC5663208
OpenAlexW2765867519

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.