Evidence map›Paper›PMID 29087304›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Patterns of conserved gp120 epitope presentation on attached HIV-1 virions.

Meron Mengistu, Ai-Hui Tang, James S Foulke, Thomas A Blanpied, Mileidy W Gonzalez, John L Spouge, Robert C Gallo, George K Lewis, Anthony L DeVico

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Trial
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  5. A Sample-Sparing Multiplexed ADCP Assay.Frontiers in immunology · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Meron MengistuInstitute of Human Virology, University of Maryland School of Medicine, Baltimore, MD 21201.
Ai-Hui TangDepartment of Physiology, University of Maryland School of Medicine, Baltimore, MD 21201.
James S FoulkeInstitute of Human Virology, University of Maryland School of Medicine, Baltimore, MD 21201.
Thomas A BlanpiedDepartment of Physiology, University of Maryland School of Medicine, Baltimore, MD 21201.
Mileidy W GonzalezNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894.
John L SpougeNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894.
Robert C GalloInstitute of Human Virology, University of Maryland School of Medicine, Baltimore, MD 21201; rgallo@ihv.umaryland.edu adevico@ihv.umaryland.edu.
George K LewisInstitute of Human Virology, University of Maryland School of Medicine, Baltimore, MD 21201.
Anthony L DeVicoInstitute of Human Virology, University of Maryland School of Medicine, Baltimore, MD 21201; rgallo@ihv.umaryland.edu adevico@ihv.umaryland.edu.
University of Maryland, Baltimore · USNational Center for Biotechnology Information · USNational Institutes of Health · US

Funding

Project 3- Mucosal Determinants of Virus TransmissionP01AI124912 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI SILVESTRI, GUIDO · 2016 to 2019
$14.4M
Bioinformatics Studies of Human VirusesZIALM091213 · NLM · NATIONAL LIBRARY OF MEDICINE · PI SPOUGE, JOHN · 2013 to 2023
$4.6M
An Upright Multiphoton Microscope for an Established Core Imaging FacilityS10OD010352 · OD · UNIVERSITY OF MARYLAND BALTIMORE · PI BLANPIED, THOMAS A · 2012 to 2012
$600k
NIAID NIH HHS P01 AI124912NIH HHS S10 OD010352
6 · The paper itself

Abstract

A complete picture of HIV antigenicity during early replication is needed to elucidate the full range of options for controlling infection. Such information is frequently gained through analyses of isolated viral envelope antigens, host CD4 receptors, and cognate antibodies. However, direct examination of viral particles and virus-cell interactions is now possible via advanced microscopy techniques and reagents. Using such methods, we recently determined that CD4-induced (CD4i) transition state epitopes in the HIV surface antigen, gp120, while not exposed on free particles, rapidly become immunoreactive upon virus-cell binding. Here, we use 3D direct stochastic optical reconstruction microscopy (dSTORM) to show that certain CD4i epitopes specific to transition state structures are exposed across the surface of cell-bound virions, thus explaining their immunoreactivity. Moreover, such structures and their marker epitopes are dispersed to regions of virions distal to CD4 contact. We further show that the appearance and positioning of distal CD4i exposures is partially dependent on Gag maturation and intact matrix-gp41 interactions within the virion. Collectively, these observations provide a unique perspective of HIV during early replication. These features may define unique insights for understanding how humoral responses target virions and for developing related antiviral countermeasures.

Indexed as

Virus AttachmentCD4 AntigensCD4 Lymphocyte CountCell LineEpitopesHIV-1HIV AntibodiesHIV AntigensHIV Envelope Protein gp120HIV Envelope Protein gp41HIV InfectionsHumansVirionCD4 AntigensEpitopesHIV AntibodiesHIV AntigensHIV Envelope Protein gp120HIV Envelope Protein gp41cell attachmentepitope positionsHIV antigenicitytransition state conformationvirion structure

Identifiers

PMID29087304
PMCPMC5699032
OpenAlexW2765182782

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.