Evidence map›Paper›PMID 29086354›Full record

ArticleArchives of pharmacal research2018

Proteomic and transcriptomic analysis of lung tissue in OVA-challenged mice.

Yongjin Lee, Yun-Ho Hwang, Kwang-Jin Kim, Ae-Kyung Park, Man-Jeong Paik, Seong Hwan Kim, Su Ui Lee, Sung-Tae Yee, Young-Jin Son

Open access · hybridAbstract read
In one paragraph

Article in Archives of pharmacal research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
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  5. Effects of Edible InsectInternational journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Yongjin LeeDepartment of Pharmacy, Sunchon National University, 255 Jungangno, Suncheon, Jeonnam, 57922, Korea.
Yun-Ho HwangDepartment of Pharmacy, Sunchon National University, 255 Jungangno, Suncheon, Jeonnam, 57922, Korea.
Kwang-Jin KimDepartment of Pharmacy, Sunchon National University, 255 Jungangno, Suncheon, Jeonnam, 57922, Korea.
Ae-Kyung ParkDepartment of Pharmacy, Sunchon National University, 255 Jungangno, Suncheon, Jeonnam, 57922, Korea.
Man-Jeong PaikDepartment of Pharmacy, Sunchon National University, 255 Jungangno, Suncheon, Jeonnam, 57922, Korea.
Seong Hwan KimLaboratory of Translational Therapeutics, Division of Drug Discovery Research, Pharmacology Research Center, Korea Research Institute of Chemical Technology, Daejeon, 34114, Korea.
Su Ui LeeNatural Medicine Research Center, Korea Research Institute of Bioscience and Biotechnology, Cheongju, Chungcheongbuk, 56212, Korea.
Sung-Tae YeeDepartment of Pharmacy, Sunchon National University, 255 Jungangno, Suncheon, Jeonnam, 57922, Korea. sungtae@sunchon.ac.kr.
Young-Jin SonDepartment of Pharmacy, Sunchon National University, 255 Jungangno, Suncheon, Jeonnam, 57922, Korea. sony@sunchon.ac.kr.
Sunchon National University · KRKorea Research Institute of Bioscience and Biotechnology · KRKorea Research Institute of Chemical Technology · KR

Funding

National Research Foundation of Korea 2015R1A4A1041219
6 · The paper itself

Abstract

Asthma is a long term inflammatory disease of the airway of lungs characterized by variable airflow obstruction and bronchospasm. Asthma is caused by a complex combination of environmental and genetic interactions. In this study, we conducted proteomic analysis of samples derived from control and OVA challenged mice for environmental respiratory disease by using 2-D gel electrophoresis. In addition, we explored the genes associated with the environmental substances that cause respiratory disease and conducted RNA-seq by next-generation sequencing. Proteomic analysis revealed 7 up-regulated (keratin KB40, CRP, HSP27, chaperonin containing TCP-1, TCP-10, keratin, and albumin) and 3 down-regulated proteins (PLC-α, PLA2, and precursor ApoA-1). The expression diversity of many genes was found in the lung tissue of OVA challenged moue by RNA-seq. 146 genes were identified as significantly differentially expressed by OVA treatment, and 118 genes of the 146 differentially expressed genes were up-regulated and 28 genes were downregulated. These genes were related to inflammation, mucin production, and airway remodeling. The results presented herein enable diagnosis and the identification of quantitative markers to monitor the progression of environmental respiratory disease using proteomics and genomic approaches.

Indexed as

ProteomicsTranscriptomeAnimalsAsthmaFemaleInflammationLungMiceMice, Inbred C57BLOvalbuminOvalbuminAsthmaEnvironmental respiratory diseaseOvalbumin (OVA)ProteomicsRNA-seq

Identifiers

PMID29086354
PMCPMC5770490
OpenAlexW2766827390

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.