Evidence map›Paper›PMID 29085060›Full record

ArticleScientific reports2017

A comparison of transcriptomic patterns measured in the skin of Chinese fine and coarse wool sheep breeds.

Lichun Zhang, Fuliang Sun, Haiguo Jin, Brian P Dalrymple, Yang Cao, Tian Wei, Tony Vuocolo, Mingxin Zhang, Qinlin Piao, Aaron B Ingham

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 40 citations in OpenAlex.

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  13. Variation inArchives animal breeding · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Lichun ZhangBranch of Husbandry, Jilin Academy of Agricultural Science (JAAS), 186 Dong Xinghua st, Gongzhuling, 136100, China.
Fuliang SunDepartment of Veterinary Medicine, College of Agriculture, Yanbian University, Yanji, 133002, China.
Haiguo JinBranch of Husbandry, Jilin Academy of Agricultural Science (JAAS), 186 Dong Xinghua st, Gongzhuling, 136100, China.
Brian P DalrympleInstitute of Agriculture, The University of Western Australia, Crawley, Perth, Western Australia, 6009, Australia.ORCID 0000-0003-3891-5233
Yang CaoBranch of Husbandry, Jilin Academy of Agricultural Science (JAAS), 186 Dong Xinghua st, Gongzhuling, 136100, China.
Tian WeiBranch of Husbandry, Jilin Academy of Agricultural Science (JAAS), 186 Dong Xinghua st, Gongzhuling, 136100, China.
Tony VuocoloCSIRO Agriculture and Food, Queensland Bioscience Precinct, 306 Carmody Rd, 4067, Queensland, Australia.
Mingxin ZhangBranch of Husbandry, Jilin Academy of Agricultural Science (JAAS), 186 Dong Xinghua st, Gongzhuling, 136100, China.
Qinlin PiaoBranch of Husbandry, Jilin Academy of Agricultural Science (JAAS), 186 Dong Xinghua st, Gongzhuling, 136100, China.
Aaron B InghamCSIRO Agriculture and Food, Queensland Bioscience Precinct, 306 Carmody Rd, 4067, Queensland, Australia. aaron.ingham@csiro.au.
Jilin Academy of Agricultural Sciences · CNCommonwealth Scientific and Industrial Research Organisation · AUThe University of Western Australia · AUYanbian University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We characterised wool traits, and skin gene expression profiles of fine wool Super Merino (SM) and coarse wool Small Tail Han (STH) sheep. SM sheep had a significantly higher total density of wool follicles, heavier fleeces, finer fibre diameter, and increased crimp frequency, staple length and wool grease (lanolin) production. We found 435 genes were expressed at significantly different levels in the skin of the two breeds (127 genes more highly in SM and 308 genes more highly in STH sheep). Classification of the genes more highly expressed in SM sheep revealed numerous lipid metabolic genes as well as genes encoding keratins, keratin-associated proteins, and wool follicle stem cell markers. In contrast, mammalian epidermal development complex genes and other genes associated with skin cornification and muscle function were more highly expressed in STH sheep. Genes identified in this study may be further evaluated for inclusion in breeding programs, or as targets for therapeutic or genetic interventions, aimed at altering wool quality or yield. Expression of the lipid metabolic genes in the skin of sheep may be used as a novel trait with the potential to alter the content or properties of lanolin or the fleece.

Indexed as

AnimalsBase SequenceFemaleHair FollicleKeratinsLanolinLipid MetabolismSequence Analysis, RNASheep, DomesticSkin Physiological PhenomenaTranscriptomeWoolKeratinsLanolin

Identifiers

PMID29085060
PMCPMC5662721
OpenAlexW2766735612

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.