Evidence map›Paper›PMID 29084988›Full record

ArticleScientific reports2017

Hypoxia tolerance, longevity and cancer-resistance in the mole rat Spalax - a liver transcriptomics approach.

Hanno Schmidt, Assaf Malik, Anne Bicker, Gesa Poetzsch, Aaron Avivi, Imad Shams, Thomas Hankeln

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Article
  3. Hypoxic and hypercapnic burrow conditions lead to downregulation of free triiodothyronine and hematocrit in Ansell's mole-rats (Fukomys anselli).Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2024
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  12. Comprehensive Analysis ofMetabolites · 2021
    Article
  13. Nontraditional systems in aging research: an update.Cellular and molecular life sciences : CMLS · 2021
    Review
  14. Article
  15. Article
  16. Article
  17. The occurrence of cancer in vertebrates: a mini review.Journal of biological research (Thessalonike, Greece) · 2020
    Review
  18. Genome-Protecting Compounds as Potential Geroprotectors.International journal of molecular sciences · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Hanno SchmidtMolecular Genetics and Genome Analysis, Institute of Organismic and Molecular Evolution, Johannes Gutenberg-University, Johann Joachim Becher-Weg 30 A, D-55128, Mainz, Germany.ORCID 0000-0001-8915-891X
Assaf MalikInstitute of Evolution, University of Haifa, Mount Carmel, Haifa, 31905, Israel.
Anne BickerMolecular Genetics and Genome Analysis, Institute of Organismic and Molecular Evolution, Johannes Gutenberg-University, Johann Joachim Becher-Weg 30 A, D-55128, Mainz, Germany.
Gesa PoetzschMolecular Genetics and Genome Analysis, Institute of Organismic and Molecular Evolution, Johannes Gutenberg-University, Johann Joachim Becher-Weg 30 A, D-55128, Mainz, Germany.
Aaron AviviInstitute of Evolution, University of Haifa, Mount Carmel, Haifa, 31905, Israel.
Imad ShamsInstitute of Evolution, University of Haifa, Mount Carmel, Haifa, 31905, Israel. imadshams@univ.haifa.ac.il.
Thomas HankelnMolecular Genetics and Genome Analysis, Institute of Organismic and Molecular Evolution, Johannes Gutenberg-University, Johann Joachim Becher-Weg 30 A, D-55128, Mainz, Germany. hankeln@uni-mainz.de.
Johannes Gutenberg University Mainz · DECarmel (Israel) · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The blind subterranean mole rat Spalax shows a remarkable tolerance to hypoxia, cancer-resistance and longevity. Unravelling the genomic basis of these adaptations will be important for biomedical applications. RNA-Seq gene expression data were obtained from normoxic and hypoxic Spalax and rat liver tissue. Hypoxic Spalax broadly downregulates genes from major liver function pathways. This energy-saving response is likely a crucial adaptation to low oxygen levels. In contrast, the hypoxia-sensitive rat shows massive upregulation of energy metabolism genes. Candidate genes with plausible connections to the mole rat's phenotype, such as important key genes related to hypoxia-tolerance, DNA damage repair, tumourigenesis and ageing, are substantially higher expressed in Spalax than in rat. Comparative liver transcriptomics highlights the importance of molecular adaptations at the gene regulatory level in Spalax and pinpoints a variety of starting points for subsequent functional studies.

Indexed as

Adaptation, PhysiologicalAgingAnimalsDNA RepairDrug ToleranceEnergy MetabolismHypoxiaImmune ToleranceLiverLongevityMole RatsRatsSequence Analysis, RNASpalaxSpecies SpecificityTranscriptome

Identifiers

PMID29084988
PMCPMC5662568
OpenAlexW2765169581

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.