Evidence map›Paper›PMID 29084602›Full record

ArticleBMC research notes2017

Isolation and identification of halotolerant soil bacteria from coastal Patenga area.

Shafkat Shamim Rahman, Romana Siddique, Nafisa Tabassum

Open access · goldAbstract read
In one paragraph

Article in BMC research notes, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 42 citations in OpenAlex.

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  5. BiominingFrontiers in microbiology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Shafkat Shamim RahmanBiotechnology Program, Department of Mathematics and Natural Sciences, BRAC University, 66, Mohakhali, Dhaka, 1212, Bangladesh. shafkatshamimrahman@gmail.com.ORCID http://orcid.org/0000-0002-9813-1548
Romana SiddiqueBiotechnology Program, Department of Mathematics and Natural Sciences, BRAC University, 66, Mohakhali, Dhaka, 1212, Bangladesh.
Nafisa TabassumBiotechnology Program, Department of Mathematics and Natural Sciences, BRAC University, 66, Mohakhali, Dhaka, 1212, Bangladesh.
BRAC University · BDBangladesh University · BD

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveHalotolerant bacteria have multiple uses viz. fermentation with lesser sterility control and industrial production of bioplastics. Moreover, it may increase the crop productivity of coastal saline lands in Bangladesh by transferring the salt tolerant genes into the plants. The study focused on the isolation and identification of the halotolerant bacteria from three soil samples, collected from coastal Patenga area. The samples were inoculated in nutrient media containing a wide range of salt concentrations.

resultsAll the samples showed 2, 4 and 6% (w/v) salt tolerance. The isolates from Patenga soil (4, 6%) and beach soil (2%) showed catalase activity and all the isolates showed negative results for oxidase activity, indole production, lactose and motility. All the samples provided positive results for dextrose fermentation. Other tests provided mixed results. Based on the morphological characteristics, biochemical tests and ABIS software analysis the isolates fall within the Enterobacteriaceae, Clostridium and Corynebacterium, with a predominance of Vibrios. Overall the isolates can be considered as mild halotolerant, with the best growth observed at lower salinities and no halophilism detected. Among many possibilities, the genes responsible for the salt tolerant trait in these species can be identified, extracted and inserted into the crop plants to form a transgenic plant to result in higher yield for the rest of the year.

Indexed as

SalinitySalt ToleranceSoil MicrobiologyBangladeshClostridiumCorynebacteriumEnterobacteriaceaeClostridiumCorynebacteriumEnterobacteriaceaeHalotolerantSalinity

Identifiers

PMID29084602
PMCPMC5663095
OpenAlexW2767015251

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.