Evidence map›Paper›PMID 29084434›Full record

ArticleAIDS research and human retroviruses2018

Distinct Pattern of Thymidine Analogue Mutations with K65R in Patients Failing Tenofovir-Based Antiretroviral Therapy.

Beth Chaplin, Godwin Imade, Chika Onwuamah, Georgina Odaibo, Rosemary Audu, Jonathan Okpokwu, David Olaleye, Seema Meloni, Holly Rawizza, Mohammad Muazu and 6 more

Abstract read
In one paragraph

Article in AIDS research and human retroviruses, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Beth Chaplin1 Department of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health , Boston, Massachusetts.
Godwin Imade2 Jos University Teaching Hospital , Jos, Nigeria .
Chika Onwuamah3 Nigerian Institute of Medical Research , Lagos, Nigeria .
Georgina Odaibo4 University College Hospital , Ibadan, Nigeria .
Rosemary Audu3 Nigerian Institute of Medical Research , Lagos, Nigeria .
Jonathan Okpokwu2 Jos University Teaching Hospital , Jos, Nigeria .
David Olaleye4 University College Hospital , Ibadan, Nigeria .
Seema Meloni1 Department of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health , Boston, Massachusetts.
Holly Rawizza1 Department of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health , Boston, Massachusetts.
Mohammad Muazu2 Jos University Teaching Hospital , Jos, Nigeria .
Adesola Z Musa3 Nigerian Institute of Medical Research , Lagos, Nigeria .
Jay Samuel6 AIDS Prevention Initiative Nigeria, Ltd./Gte. , Abuja, Nigeria .
Oche Agbaji2 Jos University Teaching Hospital , Jos, Nigeria .
Oliver Ezechi3 Nigerian Institute of Medical Research , Lagos, Nigeria .
Emmanuel Idigbe3 Nigerian Institute of Medical Research , Lagos, Nigeria .
Phyllis J Kanki1 Department of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health , Boston, Massachusetts.

Funding

"Implementation of Programs for Prevention, Care and Treatment of HIV/AIDS in theU2GPS001058 · PS · AIDS PREVENTION INITIATIVE IN NIGERIA · PI OKONKWO, PROSPER IFEANACHO · 2008 to 2013
$83.4M
ACL HHS U01GH000770CGH CDC HHS U01 GH000770NCHHSTP CDC HHS U2G PS001058
6 · The paper itself

Abstract

Historically, in HIV patients, the K65R mutation and thymidine analogue mutations (TAMs) have been reported to rarely coexist. We retrospectively reviewed genotype data from paired samples in a cohort of HIV-1-infected Nigerian patients failing first-line antiretroviral therapies containing zidovudine (AZT) or tenofovir (TDF). Samples for each patient were taken at initial confirmed virological failure ≥1000 copies/ml (S1) and then at the latest available sample with viral load ≥1000 copies/ml before switch to second line (S2). Among 103 patients failing AZT, 19 (18.4%) had TAM-1s, 29 (28.2%) TAM-2s, and 21 (20.4%) mixed TAMs by S2. In contrast, in the 87 patients failing TDF, drug resistance mutations at S2 included K65R in 56 (64.4%), TAM-1s in 1 (1.1%), and TAM-2s in 25 patients (28.7%). Interestingly, 30.4% of patients with K65R in our study developed TAMs. These were exclusively K219E ± D67N and were not predicted to confer a resistance cost to future AZT-containing regimens.

Indexed as

Drug Resistance, ViralHIV-1HIV InfectionsHIV Reverse TranscriptaseHumansNigeriaRetrospective StudiesReverse Transcriptase InhibitorsTenofovirTreatment FailureViral LoadZidovudineHIV Reverse TranscriptaseReverse Transcriptase InhibitorsTenofovirZidovudineHIVHIV drug resistanceNigeriatenofovirthymidine analogue mutationszidovudine

Identifiers

PMID29084434
PMCPMC6836671

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.