Evidence map›Paper›PMID 29084347›Full record

ArticleThe New phytologist2018

Is there foul play in the leaf pocket? The metagenome of floating fern Azolla reveals endophytes that do not fix N

Laura W Dijkhuizen, Paul Brouwer, Henk Bolhuis, Gert-Jan Reichart, Nils Koppers, Bruno Huettel, Anthony M Bolger, Fay-Wei Li, Shifeng Cheng, Xin Liu and 5 more

Open access · hybridAbstract read
In one paragraph

Article in The New phytologist, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 48 citations in OpenAlex.

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  13. Far-Red Light-InducedFrontiers in plant science · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 9 institutions in 5 countries.

Laura W DijkhuizenMolecular Plant Physiology Department, Utrecht University, Padualaan 8, Utrecht, 3584CH, the Netherlands.
Paul BrouwerMolecular Plant Physiology Department, Utrecht University, Padualaan 8, Utrecht, 3584CH, the Netherlands.
Henk BolhuisDepartment of Marine Microbiology and Biogeochemistry, Netherlands Institute for Sea Research (NIOZ), Utrecht University, Den Hoorn, 1797SZ, the Netherlands.
Gert-Jan ReichartDepartment of Earth Sciences, Utrecht University, Utrecht, 3508TA, the Netherlands.
Nils KoppersDepartment of Plant Biochemistry, Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University, Düsseldorf, 40225, Germany.
Bruno HuettelMax Planck Institute for Plant Breeding ADIS/DNA Core Facility, Cologne, 50829, Germany.
Anthony M BolgerInstitute of Botany and Molecular Genetics IBMG, IRWTH Aachen University, 52074, Aachen, Germany.
Fay-Wei LiDepartment of Biology, Duke University, Durham, NC, 27708, USA.
Shifeng ChengBeijing Genomics Institute-Shenzhen, Shenzhen, 518083, China.
Xin LiuBeijing Genomics Institute-Shenzhen, Shenzhen, 518083, China.
Gane Ka-Shu WongBeijing Genomics Institute-Shenzhen, Shenzhen, 518083, China.
Kathleen PryerDepartment of Biology, Duke University, Durham, NC, 27708, USA.
Andreas WeberDepartment of Plant Biochemistry, Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University, Düsseldorf, 40225, Germany.
Andrea BräutigamDepartment of Plant Biochemistry, Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University, Düsseldorf, 40225, Germany.
Henriette SchluepmannMolecular Plant Physiology Department, Utrecht University, Padualaan 8, Utrecht, 3584CH, the Netherlands.
Utrecht University · NLBGI Group (China) · CNCluster of Excellence on Plant Sciences · DECornell University · USDuke University · USHeinrich Heine University Düsseldorf · DEMax Planck Institute for Plant Breeding Research · DERoyal Netherlands Institute for Sea Research · NLRWTH Aachen University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dinitrogen fixation by Nostoc azollae residing in specialized leaf pockets supports prolific growth of the floating fern Azolla filiculoides. To evaluate contributions by further microorganisms, the A. filiculoides microbiome and nitrogen metabolism in bacteria persistently associated with Azolla ferns were characterized. A metagenomic approach was taken complemented by detection of N

Indexed as

AlphaproteobacteriaBiomassDenitrificationEndophytesFernsMetagenomeMicrobiotaNitrogenNitrogen FixationNitrogen IsotopesNostocOxygenPlant LeavesWaterWater MicrobiologyNitrogenNitrogen IsotopesOxygenWater15N isotopeAzolladenitrificationditch water microbiomemetagenomeN2-fixationNostocRhizobiales

Identifiers

PMID29084347
PMCPMC5901025
OpenAlexW2765868785

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.