Evidence map›Paper›PMID 29084254›Full record

ArticlePloS one2017

Isolation and molecular identification of endophytic diazotrophs from seeds and stems of three cereal crops.

Huawei Liu, Lei Zhang, Aihua Meng, Junbiao Zhang, Miaomiao Xie, Yaohong Qin, Dylan Chase Faulk, Baohong Zhang, Shushen Yang, Li Qiu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
5.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Frontiers in microbiology · 2019
    Article
  8. Article
  9. Nitrogen Fixation in Cereals.Frontiers in microbiology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Huawei LiuCollege of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China.
Lei ZhangCollege of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi, China.
Aihua MengCollege of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China.
Junbiao ZhangCollege of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China.
Miaomiao XieCollege of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China.
Yaohong QinCollege of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China.
Dylan Chase FaulkDepartment of Biology, East Carolina University, Greenville, North Carolina, United States of America.
Baohong ZhangDepartment of Biology, East Carolina University, Greenville, North Carolina, United States of America.ORCID http://orcid.org/0000-0002-9308-4340
Shushen YangCollege of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China.
Li QiuCollege of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi, China.
Northwest A&F University · CNEast Carolina University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ten strains of endophytic diazotroph were isolated and identified from the plants collected from three different agricultural crop species, wheat, rice and maize, using the nitrogen-free selective isolation conditions. The nitrogen-fixing ability of endophytic diazotroph was verified by the nifH-PCR assay that showed positive nitrogen fixation ability. These identified strains were classified by 879F-RAPD and 16S rRNA sequence analysis. RAPD analyses revealed that the 10 strains were clustered into seven 879F-RAPD groups, suggesting a clonal origin. 16S rRNA sequencing analyses allowed the assignment of the 10 strains to known groups of nitrogen-fixing bacteria, including organisms from the genera Paenibacillus, Enterobacter, Klebsiella and Pantoea. These representative genus are not endophytic diazotrophs in the conventional sense. They may have obtained nitrogen fixation ability through lateral gene transfer, however, the evolutionary forces of lateral gene transfer are not well known. Molecular identification results from 16S rRNA analyses were also confirmed by morphological and biochemical data. The test strains SH6A and MZB showed positive effect on the growth of plants.

Indexed as

Crops, AgriculturalEdible GrainEndophytesGenes, PlantPhylogenyPlant StemsRandom Amplified Polymorphic DNA TechniqueRNA, Ribosomal, 16SSeedsRNA, Ribosomal, 16S

Identifiers

PMID29084254
PMCPMC5662235
OpenAlexW2765510087

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.