Evidence map›Paper›PMID 29084178›Full record

ArticleInternational journal of molecular sciences2017

Comparative Morphology, Transcription, and Proteomics Study Revealing the Key Molecular Mechanism of Camphor on the Potato Tuber Sprouting Effect.

Li-Qin Li, Xue Zou, Meng-Sheng Deng, Jie Peng, Xue-Li Huang, Xue Lu, Chen-Cheng Fang, Xi-Yao Wang

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 32 citations in OpenAlex.

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  8. Relationship between the Phenylpropanoid Pathway and Dwarfism ofInternational journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Li-Qin LiCollege of Agronomy, Sichuan Agricultural University, Chengdu 611130, China. liliqin@sicau.edu.cn.
Xue ZouCollege of Agronomy, Sichuan Agricultural University, Chengdu 611130, China. zou_xue_2008@aliyun.com.
Meng-Sheng DengCollege of Agronomy, Sichuan Agricultural University, Chengdu 611130, China. dengmengsheng87@hotmail.com.
Jie PengCollege of Agronomy, Sichuan Agricultural University, Chengdu 611130, China. gusongke1988@163.com.
Xue-Li HuangCollege of Agronomy, Sichuan Agricultural University, Chengdu 611130, China. hxueli1983@163.com.
Xue LuCollege of Agronomy, Sichuan Agricultural University, Chengdu 611130, China. lorilu0917@163.com.
Chen-Cheng FangCollege of Agronomy, Sichuan Agricultural University, Chengdu 611130, China. chenchengfang0211@163.com.
Xi-Yao WangCollege of Agronomy, Sichuan Agricultural University, Chengdu 611130, China. wxyrtl@163.com.
Sichuan Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sprouting regulation in potato tubers is important for improving commercial value and producing new plants. Camphor shows flexible inhibition of tuber sprouting and prolongs the storage period of potato, but its underlying mechanism remains unknown. The results of the present study suggest that camphor inhibition caused bud growth deformities and necrosis, but after moving to more ventilated conditions, new sprouts grew from the bud eye of the tuber. Subsequently, the sucrose and fructose contents as well as polyphenol oxidase (PPO) activity were assessed after camphor inhibition. Transcription and proteomics data from dormancy (D), sprouting (S), camphor inhibition (C), and recovery sprouting (R) samples showed changes in the expression levels of approximately 4000 transcripts, and 700 proteins showed different abundances. KEGG (Kyoto encyclopaedia of genes and genomes) pathway analysis of the transcription levels indicated that phytohormone synthesis and signal transduction play important roles in tuber sprouting. Camphor inhibited these processes, particularly for gibberellic acid, brassinosteroids, and ethylene, leading to dysregulation of physiological processes such as cutin, suberine and wax biosynthesis, fatty acid elongation, phenylpropanoid biosynthesis, and starch and sucrose metabolism, resulting in bud necrosis and prolonged storage periods. The KEGG pathway correlation between transcripts and proteins revealed that terpenoid backbone biosynthesis and plant-pathogen interaction pathways showed significant differences in D vs. S samples, but 13 pathways were remarkably different in the D vs. C groups, as camphor inhibition significantly increased both the transcription levels and protein abundance of pathogenesis-related protein PR-10a (or STH-2), the pathogenesis-related P2-like precursor protein, and the kirola-like protein as compared to sprouting. In recovery sprouting, these genes and proteins were decreased at both the transcriptional level and in protein abundance. It was important to find that the inhibitory effect of camphor on potato tuber sprout was reversible, revealing the action mechanism was similar to resistance to pathogen infection. The present study provides a theoretical basis for the application of camphor in prolonging seed potato storage.

Indexed as

Gene Expression ProfilingProteomicsCamphorComputational BiologyFructoseGene Expression Regulation, PlantGene Regulatory NetworksPhenotypePlant TubersProteomeSignal TransductionSolanum tuberosumSucroseTranscriptomeCamphorFructoseProteomeSucrosecamphorpotatoproteomicssproutingtranscriptiontuber

Identifiers

PMID29084178
PMCPMC5713250
OpenAlexW2765807469

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.