Evidence map›Paper›PMID 29080902›Full record

ArticleAnalytical and bioanalytical chemistry2017

A pilot study on fingerprinting Leishmania species from the Old World using Fourier transform infrared spectroscopy.

Andrea Hornemann, Denise Sinning, Sofia Cortes, Lenea Campino, Peggy Emmer, Katrin Kuhls, Gerhard Ulm, Marcus Frohme, Burkhard Beckhoff

Abstract read
In one paragraph

Article in Analytical and bioanalytical chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Andrea HornemannDepartment 7.2 Cryophysics and Spectrometry, Physikalisch-Technische Bundesanstalt, Abbestr. 2-12, 10587, Berlin, Germany. andrea.hornemann@ptb.de.
Denise SinningDepartment 7.2 Cryophysics and Spectrometry, Physikalisch-Technische Bundesanstalt, Abbestr. 2-12, 10587, Berlin, Germany.
Sofia CortesDivision of Molecular Biotechnology and Functional Genomics, Technical University of Applied Sciences, Hochschulring 1, 15745, Wildau, Germany.
Lenea CampinoGlobal Health and Tropical Medicine Center (GHTM), Instituto de Higiene e Medicina Tropical (IHMT), Universidade Nova de Lisboa, Rua Junqueira 100, 1349-008, Lisbon, Portugal.
Peggy EmmerDepartment 7.2 Cryophysics and Spectrometry, Physikalisch-Technische Bundesanstalt, Abbestr. 2-12, 10587, Berlin, Germany.
Katrin KuhlsDivision of Molecular Biotechnology and Functional Genomics, Technical University of Applied Sciences, Hochschulring 1, 15745, Wildau, Germany.
Gerhard UlmDepartment 7.2 Cryophysics and Spectrometry, Physikalisch-Technische Bundesanstalt, Abbestr. 2-12, 10587, Berlin, Germany.
Marcus FrohmeDivision of Molecular Biotechnology and Functional Genomics, Technical University of Applied Sciences, Hochschulring 1, 15745, Wildau, Germany.
Burkhard BeckhoffDepartment 7.2 Cryophysics and Spectrometry, Physikalisch-Technische Bundesanstalt, Abbestr. 2-12, 10587, Berlin, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leishmania species are protozoan parasites and the causative agents of leishmaniasis, a vector borne disease that imposes a large health burden on individuals living mainly in tropical and subtropical regions. Different Leishmania species are responsible for the distinct clinical patterns, such as cutaneous, mucocutaneous, and visceral leishmaniasis, with the latter being potentially fatal if left untreated. For this reason, it is important to perform correct species identification and differentiation. Fourier transform infrared spectroscopy (FTIR) is an analytical spectroscopic technique increasingly being used as a potential tool for identification of microorganisms for diagnostic purposes. By employing mid-infrared (MIR) spectral data, it is not only possible to assess the chemical structures but also to achieve differentiation supported by multivariate statistic analysis. This work comprises a pilot study on differentiation of Leishmania species of the Old World (L. major, L. tropica, L. infantum, and L. donovani) as well as hybrids of distinct species by using vibrational spectroscopic fingerprints. Films of intact Leishmania parasites and their deoxyribonucleic acid (DNA) were characterized comparatively with respect to their biochemical nature and MIR spectral patterns. The strains' hyperspectral datasets were multivariately examined by means of variance-based principal components analysis (PCA) and distance-based hierarchical cluster analysis (HCA). With the implementation of MIR spectral datasets we show that a phenotypic differentiation of Leishmania at species and intra-species level is feasible. Thus, FTIR spectroscopy can be further exploited for building up spectral databases of Leishmania parasites in view of high-throughput analysis of clinical specimens. Graphical abstract For Leishmania species discrimination, sample films of intact parasites and their extracted DNA were analyzed by FTIR micro-spectroscopy. Hyperspectral datasets that comprise mid-infrared fingerprints were submitted to multivariate analysis tools such as principal components analysis (PCA) and hierarchical cluster analysis (HCA).

Indexed as

DNA FingerprintingSpectroscopy, Fourier Transform InfraredCluster AnalysisHumansLeishmaniaMultivariate AnalysisPilot ProjectsPrincipal Component AnalysisDNAFourier transform infrared spectroscopyHierarchical cluster analysis (HCA)LeishmaniaMultivariate differentiationPrincipal components analysis (PCA)

Identifiers

PMID29080902
PMCPMC5670197

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