Evidence map›Paper›PMID 29079971›Full record

ArticleChromosoma2018

Characterization of the lamin analogue NMCP2 in the monocot Allium cepa.

Malgorzata Ciska, Kiyoshi Masuda, Susana Moreno Díaz de la Espina

Abstract read
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In one paragraph

Article in Chromosoma, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Malgorzata CiskaCell and Molecular Biology Department, Centre of Biological Research, CSIC, Ramiro de Maeztu 9, 28040, Madrid, Spain.
Kiyoshi MasudaLaboratory of Crop Physiology, Research Faculty of Agriculture, Hokkaido University, Sapporo, 060-8589, Japan.
Susana Moreno Díaz de la EspinaCell and Molecular Biology Department, Centre of Biological Research, CSIC, Ramiro de Maeztu 9, 28040, Madrid, Spain. smoreno@cib.csic.es.ORCID 0000-0002-5795-0299
Consejo Superior de Investigaciones Científicas · ESHokkaido University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nuclear lamina organization is similar in metazoan and plants though the latter lack orthologs of lamins, the main components of the metazoan lamina. Current evidence suggests that Nuclear Matrix Constituent Proteins (NMCPs) are the lamin analogues in plants as these proteins share several key features: higher-order secondary structure and domain layout, subnuclear distribution, and involvement in the regulation of nuclear shape and size, as well as in higher-order chromatin organization. Previously, we studied the NMCP family in flowering plants (angiosperms), in which it comprises two phylogenetic groups: NMCP1 and NMCP2. At present, in silico information about NMCP proteins in embryophytes is relatively advanced, though very few proteins, most of them of the NMCP1 type, have been extensively studied in vivo. We previously characterized the NCMP1 protein in the monocot Allium cepa. Here, we report the key features of a second protein of this species NMCP2, which presents a conserved sequence and domain layout. Immunofluorescence and immunoelectronmicroscopy evidence co-localization of endogenous AcNMCP2 and AcNMCP1 in the lamina, while Western blotting and immunoconfocal microscopy reveal a similar pattern of expression and distribution of both NMCP proteins in different root tissues. Our results provide novel insight about endogenous NMCP2-type proteins and complete the characterization of the NMCP family in A. cepa, thus advancing the current understanding of these structural proteins constituting the plant lamina.

Indexed as

Cell ProliferationImmunohistochemistryIn Situ HybridizationLaminsNuclear ProteinsOnionsPhylogenyPlant ProteinsSequence Analysis, DNAStructure-Activity RelationshipLaminsNuclear ProteinsPlant ProteinsAllium cepa NMCP2 and NMCP1 proteinsBioinformatic analysisImmunofluorescence and immunoelectronmicroscopyPhylogenetic analysisPlant laminaProtein analysis

Identifiers

PMID29079971
OpenAlexW2765549079

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.