Evidence map›Paper›PMID 29079657›Full record

ArticleEMBO reports2017

TORC1 and TORC2 converge to regulate the SAGA co-activator in response to nutrient availability.

Thomas Laboucarié, Dylane Detilleux, Ricard A Rodriguez-Mias, Céline Faux, Yves Romeo, Mirita Franz-Wachtel, Karsten Krug, Boris Maček, Judit Villén, Janni Petersen and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in EMBO reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. UPS writes a new saga of SAGA.Biochimica et biophysica acta. Gene regulatory mechanisms · 2023
    Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Autophagy in Cancer: A Metabolic Perspective.Sub-cellular biochemistry · 2022
    Review
  14. Article
  15. Review
  16. GCN5 acetyltransferase in cellular energetic and metabolic processes.Biochimica et biophysica acta. Gene regulatory mechanisms · 2021
    Review
  17. Epigenetic Regulation of Autophagy Beyond the Cytoplasm: A Review.Frontiers in cell and developmental biology · 2021
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Thomas LaboucariéCRBM, CNRS, University of Montpellier, Montpellier, France.
Dylane DetilleuxCRBM, CNRS, University of Montpellier, Montpellier, France.
Ricard A Rodriguez-MiasDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Céline FauxCRBM, CNRS, University of Montpellier, Montpellier, France.
Yves RomeoCRBM, CNRS, University of Montpellier, Montpellier, France.
Mirita Franz-WachtelProteome Center Tübingen, Tuebingen, Germany.
Karsten KrugProteome Center Tübingen, Tuebingen, Germany.
Boris MačekProteome Center Tübingen, Tuebingen, Germany.
Judit VillénDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Janni PetersenFlinders Centre for Innovation in Cancer, School of Medicine, Faculty of Health Science, Flinders University, Adelaide, SA, Australia.
Dominique HelmlingerCRBM, CNRS, University of Montpellier, Montpellier, France dhelmlinger@crbm.cnrs.fr.ORCID 0000-0003-1501-0423
Centre National de la Recherche Scientifique · FRUniversity of Washington · USFlinders University · AU

Funding

Towards a comprehensive roadmap of cellular signaling.R35GM119536 · NIGMS · UNIVERSITY OF WASHINGTON · PI VILLEN, JUDIT · 2016 to 2020
$2.2M
NIGMS NIH HHS R35 GM119536
6 · The paper itself

Abstract

Gene expression regulation is essential for cells to adapt to changes in their environment. Co-activator complexes have well-established roles in transcriptional regulation, but less is known about how they sense and respond to signaling cues. We have previously shown that, in fission yeast, one such co-activator, the SAGA complex, controls gene expression and the switch from proliferation to differentiation in response to nutrient availability. Here, using a combination of genetic, biochemical, and proteomic approaches, we show that SAGA responds to nutrients through the differential phosphorylation of its Taf12 component, downstream of both the TORC1 and TORC2 pathways. Taf12 phosphorylation increases early upon starvation and is controlled by the opposing activities of the PP2A phosphatase, which is activated by TORC1, and the TORC2-activated Gad8

Indexed as

Gene Expression Regulation, FungalCytoplasmMechanistic Target of Rapamycin Complex 1Mechanistic Target of Rapamycin Complex 2MutationPhosphorylationProteomicsSchizosaccharomycesSchizosaccharomyces pombe ProteinsSignal TransductionTrans-ActivatorsTranscription, GeneticMechanistic Target of Rapamycin Complex 1Mechanistic Target of Rapamycin Complex 2Schizosaccharomyces pombe ProteinsTrans-Activatorsdifferentiationfission yeastSAGAsignal transductionTORtranscription

Identifiers

PMID29079657
PMCPMC5709762
OpenAlexW2766301267

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.