Evidence map›Paper›PMID 29079574›Full record

ArticleThe Journal of biological chemistry2017

Interferon regulatory factor 5 (IRF5) suppresses hepatitis C virus (HCV) replication and HCV-associated hepatocellular carcinoma.

Ozge Cevik, Dan Li, Erdene Baljinnyam, Dinesh Manvar, Erica M Pimenta, Gulam Waris, Betsy J Barnes, Neerja Kaushik-Basu

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
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  5. Article
  6. The Role of Interferon Regulatory Factors in Liver Diseases.International journal of molecular sciences · 2024
    Review
  7. Article
  8. Review
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  15. IRF5 Is Required for Bacterial Clearance in Human M1-Polarized Macrophages, andJournal of immunology (Baltimore, Md. : 1950) · 2019
    Article
  16. Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Ozge CevikFrom the Department of Microbiology, Biochemistry and Molecular Genetics, Rutgers Biomedical and Health Sciences, Newark, New Jersey 07103.
Dan LiFrom the Department of Microbiology, Biochemistry and Molecular Genetics, Rutgers Biomedical and Health Sciences, Newark, New Jersey 07103.
Erdene BaljinnyamFrom the Department of Microbiology, Biochemistry and Molecular Genetics, Rutgers Biomedical and Health Sciences, Newark, New Jersey 07103.
Dinesh ManvarFrom the Department of Microbiology, Biochemistry and Molecular Genetics, Rutgers Biomedical and Health Sciences, Newark, New Jersey 07103.
Erica M PimentaFrom the Department of Microbiology, Biochemistry and Molecular Genetics, Rutgers Biomedical and Health Sciences, Newark, New Jersey 07103.
Gulam Waristhe Rosalind Franklin University of Medicine and Science, Chicago, Illinois 60064, and.
Betsy J BarnesFrom the Department of Microbiology, Biochemistry and Molecular Genetics, Rutgers Biomedical and Health Sciences, Newark, New Jersey 07103, bbarnes1@northwell.edu.
Neerja Kaushik-BasuFrom the Department of Microbiology, Biochemistry and Molecular Genetics, Rutgers Biomedical and Health Sciences, Newark, New Jersey 07103, neerja.kaushik-basu@nih.gov.
Rutgers HealthRutgers, The State University of New Jersey · USFeinstein Institute for Medical Research · USRosalind Franklin University of Medicine and Science · US

Funding

Determining the function of IRF5 tumor suppressor in HCV pathogenesisR21CA191903 · NCI · FEINSTEIN INSTITUTE FOR MEDICAL RESEARCH · PI BARNES, BETSY J · 2015 to 2016
$403k
Role of Autotaxin in HCV-associated Hepatocellular CarcinomaR21CA153147 · NCI · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI KAUSHIK-BASU, NEERJA · 2010 to 2011
$367k
NCI NIH HHS R21 CA153147NCI NIH HHS R21 CA191903
6 · The paper itself

Abstract

Hepatitis C virus (HCV) infection is a major risk factor for the development of chronic liver disease. The disease typically progresses from chronic HCV to fibrosis, cirrhosis, hepatocellular carcinoma (HCC), and death. Chronic inflammation associated with HCV infection is implicated in cirrhosis and HCC, but the molecular players and signaling pathways contributing to these processes remain largely unknown. Interferon regulatory factor 5 (IRF5) is a molecule of interest in HCV-associated HCC because it has critical roles in virus-, Toll-like receptor (TLR)-, and IFN-induced signaling pathways. IRF5 is also a tumor suppressor, and its expression is dysregulated in several human cancers. Here, we present first evidence that IRF5 expression and signaling are modulated during HCV infection. Using HCV infection of human hepatocytes and cells with autonomously replicating HCV RNA, we found that levels of IRF5 mRNA and protein expression were down-regulated. Of note, reporter assays indicated that IRF5 re-expression inhibited HCV protein translation and RNA replication. Gene expression analysis revealed significant differences in the expression of cancer pathway mediators and autophagy proteins rather than in cytokines between IRF5- and empty vector-transfected HCV replicon cells. IRF5 re-expression induced apoptosis via loss in mitochondrial membrane potential, down-regulated autophagy, and inhibited hepatocyte cell migration/invasion. Analysis of clinical HCC specimens supports a pathologic role for IRF5 in HCV-induced HCC, as IRF5 expression was down-regulated in livers from HCV-positive

Indexed as

Carcinoma, HepatocellularCell Line, TumorHepacivirusHepatitis CHepatitis C, ChronicHepatocytesHumansInterferon Regulatory FactorsLiverLiver CirrhosisLiver NeoplasmsSignal TransductionVirus ReplicationInterferon Regulatory FactorsIRF5 protein, humanHepatitis C virus (HCV)hepatocellular carcinomaimmunosuppressioninterferon regulatory factor (IRF)tumor suppressor geneviral immunology

Identifiers

PMID29079574
PMCPMC5766933
OpenAlexW2765964655

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.