Evidence map›Paper›PMID 29078804›Full record

ArticleGenome medicine2017

Nuclear Wiskott-Aldrich syndrome protein co-regulates T cell factor 1-mediated transcription in T cells.

Nikolai V Kuznetsov, Bader Almuzzaini, Joanna S Kritikou, Marisa A P Baptista, Mariana M S Oliveira, Marton Keszei, Scott B Snapper, Piergiorgio Percipalle, Lisa S Westerberg

Open access · goldAbstract read
In one paragraph

Article in Genome medicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 5 countries.

Nikolai V KuznetsovDepartment of Microbiology Tumor and Cell biology, Karolinska Institutet, Stockholm, 171 77, Sweden.
Bader AlmuzzainiDepartment of Cell and Molecular Biology, Karolinska Institutet, Stockholm, 171 77, Sweden.
Joanna S KritikouDepartment of Microbiology Tumor and Cell biology, Karolinska Institutet, Stockholm, 171 77, Sweden.
Marisa A P BaptistaDepartment of Microbiology Tumor and Cell biology, Karolinska Institutet, Stockholm, 171 77, Sweden.
Mariana M S OliveiraDepartment of Microbiology Tumor and Cell biology, Karolinska Institutet, Stockholm, 171 77, Sweden.
Marton KeszeiDepartment of Microbiology Tumor and Cell biology, Karolinska Institutet, Stockholm, 171 77, Sweden.
Scott B SnapperGastroenterology Division, Children's Hospital, Harvard Medical School, Boston, MA, 02115, USA.
Piergiorgio PercipalleDepartment of Cell and Molecular Biology, Karolinska Institutet, Stockholm, 171 77, Sweden.
Lisa S WesterbergDepartment of Microbiology Tumor and Cell biology, Karolinska Institutet, Stockholm, 171 77, Sweden. Lisa.Westerberg@ki.se.
Karolinska Institutet · SEBoston Children's Hospital · USKing Saud bin Abdulaziz University for Health Sciences · SANew York University Abu Dhabi · AE

Funding

STRUCTURE-FUNCTION RELATIONSHIPS IN THE ALIMENTARY TRACTP30DK034854 · NIDDK · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI JONATHAN C KAGAN · 1986 to 2026
$32.4M
NIDDK NIH HHS P30 DK034854
6 · The paper itself

Abstract

backgroundThe Wiskott-Aldrich syndrome protein (WASp) family of actin-nucleating factors are present in the cytoplasm and in the nucleus. The role of nuclear WASp for T cell development remains incompletely defined.

methodsWe performed WASp chromatin immunoprecipitation and deep sequencing (ChIP-seq) in thymocytes and spleen CD4

resultsWASp was enriched at genic and intergenic regions and associated with the transcription start sites of protein-coding genes. Thymocytes and spleen CD4

conclusionsThese data place nuclear WASp in proximity with TCF1 and TCF12, essential factors for T cell development.

Indexed as

Gene Expression RegulationAnimalsBinding SitesCD4-Positive T-LymphocytesCell NucleusCells, CulturedChromatin ImmunoprecipitationDNAMaleMiceMice, Inbred C57BLT Cell Transcription Factor 1ThymocytesT-LymphocytesTranscription, GeneticWiskott-Aldrich Syndrome ProteinDNAT Cell Transcription Factor 1Wiskott-Aldrich Syndrome ProteinChIP-seqNucleusT cellsTCF1TCF12WASpWiskott–Aldrich syndrome

Identifiers

PMID29078804
PMCPMC5660450
OpenAlexW2765342808

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.