Evidence map›Paper›PMID 29077445›Full record

ArticlePhysical review letters2017

Correlations in Scattered X-Ray Laser Pulses Reveal Nanoscale Structural Features of Viruses.

Ruslan P Kurta, Jeffrey J Donatelli, Chun Hong Yoon, Peter Berntsen, Johan Bielecki, Benedikt J Daurer, Hasan DeMirci, Petra Fromme, Max Felix Hantke, Filipe R N C Maia and 14 more

Abstract read
In one paragraph

Article in Physical review letters, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Ruslan P KurtaEuropean XFEL GmbH, Holzkoppel 4, D-22869 Schenefeld, Germany.
Jeffrey J DonatelliMathematics Department, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, California 94720, USA.
Chun Hong YoonLinac Coherent Light Source, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, USA.
Peter BerntsenAustralian Research Council Centre of Excellence in Advanced Molecular Imaging, La Trobe Institute for Molecular Science, La Trobe University, Melbourne 3086, Australia.
Johan BieleckiEuropean XFEL GmbH, Holzkoppel 4, D-22869 Schenefeld, Germany.
Benedikt J DaurerLaboratory of Molecular Biophysics, Department of Cell and Molecular Biology, Uppsala University, SE-751 24 Uppsala, Sweden.
Hasan DeMirciBiosciences Division, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, USA.
Petra FrommeBiodesign Center for Applied Structural Discovery and School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287-1604, USA.
Max Felix HantkeLaboratory of Molecular Biophysics, Department of Cell and Molecular Biology, Uppsala University, SE-751 24 Uppsala, Sweden.
Filipe R N C MaiaLaboratory of Molecular Biophysics, Department of Cell and Molecular Biology, Uppsala University, SE-751 24 Uppsala, Sweden.
Anna MunkeLaboratory of Molecular Biophysics, Department of Cell and Molecular Biology, Uppsala University, SE-751 24 Uppsala, Sweden.
Carl NettelbladLaboratory of Molecular Biophysics, Department of Cell and Molecular Biology, Uppsala University, SE-751 24 Uppsala, Sweden.
Kanupriya PandeCenter for Advanced Mathematics for Energy Research Applications, 1 Cyclotron Road, Berkeley, California 94720, USA.
Hemanth K N ReddyLaboratory of Molecular Biophysics, Department of Cell and Molecular Biology, Uppsala University, SE-751 24 Uppsala, Sweden.
Jonas A SellbergLaboratory of Molecular Biophysics, Department of Cell and Molecular Biology, Uppsala University, SE-751 24 Uppsala, Sweden.
Raymond G SierraLinac Coherent Light Source, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, USA.
Martin SvendaLaboratory of Molecular Biophysics, Department of Cell and Molecular Biology, Uppsala University, SE-751 24 Uppsala, Sweden.
Gijs van der SchotLaboratory of Molecular Biophysics, Department of Cell and Molecular Biology, Uppsala University, SE-751 24 Uppsala, Sweden.
Ivan A VartanyantsDeutsches Elektronen-Synchrotron DESY, Notkestraße 85, D-22607 Hamburg, Germany.
Garth J WilliamsNSLS-II, Brookhaven National Laboratory, P.O. Box 5000, Upton, New York 11973, USA.
P Lourdu XavierCenter for Free-Electron Laser Science, Deutsches Elektronen-Synchrotron DESY, Notkestraße 85, 22607 Hamburg, Germany.
Andrew AquilaLinac Coherent Light Source, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, USA.
Peter H ZwartCenter for Advanced Mathematics for Energy Research Applications, 1 Cyclotron Road, Berkeley, California 94720, USA.
Adrian P MancusoEuropean XFEL GmbH, Holzkoppel 4, D-22869 Schenefeld, Germany.

Funding

Femtosecond nano-crystallography of membrane proteinsR01GM095583 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI FROMME, PETRA · 2010 to 2023
$4.3M
The Development of Computational Methods for Fluctuation Xray ScatteringR01GM109019 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI ZWART, PETRUS H · 2014 to 2018
$1.9M
European Research Council 609920NIGMS NIH HHS R01 GM095583NIGMS NIH HHS R01 GM109019
6 · The paper itself

Abstract

We use extremely bright and ultrashort pulses from an x-ray free-electron laser (XFEL) to measure correlations in x rays scattered from individual bioparticles. This allows us to go beyond the traditional crystallography and single-particle imaging approaches for structure investigations. We employ angular correlations to recover the three-dimensional (3D) structure of nanoscale viruses from x-ray diffraction data measured at the Linac Coherent Light Source. Correlations provide us with a comprehensive structural fingerprint of a 3D virus, which we use both for model-based and ab initio structure recovery. The analyses reveal a clear indication that the structure of the viruses deviates from the expected perfect icosahedral symmetry. Our results anticipate exciting opportunities for XFEL studies of the structure and dynamics of nanoscale objects by means of angular correlations.

Indexed as

X-Ray DiffractionLasersRadiographyViruses

Identifiers

PMID29077445
PMCPMC5757528

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.