Evidence map›Paper›PMID 29076617›Full record

ReviewGenesis (New York, N.Y. : 2000)2018

Appendages and gene regulatory networks: Lessons from the limbless.

Carlos R Infante, Ashley M Rasys, Douglas B Menke

Open access · greenAbstract readReview
In one paragraph

Review in Genesis (New York, N.Y. : 2000), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
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  5. Article
  6. Ocular elongation and retraction in foveated reptiles.Developmental dynamics : an official publication of the American Association of Anatomists · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Carlos R InfanteDepartment of Molecular and Cellular Biology, University of Arizona, Tucson, Arizona, 85721.
Ashley M RasysDepartment of Cellular Biology, University of Georgia, Athens, Georgia, 30602.
Douglas B MenkeDepartment of Genetics, University of Georgia, Athens, Georgia, 30602.ORCID 0000-0002-7109-1451
University of Georgia · USUniversity of Arizona · US

Funding

T32 Predoctoral training grant in geneticsT32GM007103 · NIGMS · UNIVERSITY OF GEORGIA (UGA) · PI DYER, KELLY A · 1985 to 2021
$5.9M
Developmental context and the control of appendage cis-regulatory networksR01HD081034 · NICHD · UNIVERSITY OF GEORGIA · PI MENKE, DOUGLAS BAY · 2014 to 2018
$1.5M
NICHD NIH HHS R01 HD081034NIGMS NIH HHS T32 GM007103
6 · The paper itself

Abstract

Among squamate reptiles, dozens of lineages have independently evolved complete or partial limb reduction. This remarkable convergence of limbless and limb-reduced phenotypes provides multiple natural replicates of different ages to explore the evolution and development of the vertebrate limb and the gene regulatory network that controls its formation. The most successful and best known of the limb-reduced squamates are snakes, which evolved a limb-reduced body form more than 100 million years ago. Recent studies have revealed the unexpected finding that many ancient limb enhancers are conserved in the genomes of snakes. Analyses in limbed animals show that many of these limb enhancers are also active during development of the phallus, suggesting that these enhancers may have been retained in snakes due their importance in regulating transcription in the external genitalia. This hypothesis is substantiated by functional tests of snake enhancers, which demonstrate that snake enhancer elements have lost limb function while retaining genital enhancer function. The large degree of overlap in the gene regulatory networks deployed during limb and phallus development may act to constrain the divergence of shared gene network components and the evolution of appendage morphology. Future studies will reveal whether limb regulatory elements have undergone similar functional changes in other lineages of limb-reduced squamates.

Indexed as

Biological EvolutionExtremitiesGene Regulatory NetworksAnimalsGenetic PleiotropyReptilesSnakesenhancerlimblizardsnakesquamate

Identifiers

PMID29076617
PMCPMC5783778
OpenAlexW2766177657

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.