Evidence map›Paper›PMID 29074958›Full record

ArticleNature communications2017

Large-scale suppression of recombination predates genomic rearrangements in Neurospora tetrasperma.

Yu Sun, Jesper Svedberg, Markus Hiltunen, Pádraic Corcoran, Hanna Johannesson

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 60 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Yu SunGuangdong Provincial Key Laboratory of Protein Function and Regulation in Agricultural Organisms, College of Life Sciences, South China Agricultural University, Guangzhou, 510642, China.
Jesper SvedbergDepartment of Organismal Biology, Uppsala University, Norbyvägen 18D, 752 36, Uppsala, Sweden.
Markus HiltunenDepartment of Organismal Biology, Uppsala University, Norbyvägen 18D, 752 36, Uppsala, Sweden.
Pádraic CorcoranDepartment of Animal and Plant Sciences, University of Sheffield, Sheffield, S10 2TN, UK.
Hanna JohannessonDepartment of Organismal Biology, Uppsala University, Norbyvägen 18D, 752 36, Uppsala, Sweden. Hanna.Johannesson@ebc.uu.se.
Uppsala University · SESouth China Agricultural University · CNUniversity of Sheffield · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A common feature of eukaryote genomes is large chromosomal regions where recombination is absent or strongly reduced, but the factors that cause this reduction are not well understood. Genomic rearrangements have often been implicated, but they may also be a consequence of recombination suppression rather than a cause. In this study, we generate eight high-quality genomic data sets of the filamentous ascomycete Neurospora tetrasperma, a fungus that lacks recombination over most of its largest chromosome. The genomes surprisingly reveal collinearity of the non-recombining regions and although large inversions are enriched in these regions, we conclude these inversions to be derived and not the cause of the suppression. To our knowledge, this is the first time that non-recombining, genic regions as large as 86% of a full chromosome (or 8 Mbp), are shown to be collinear. These findings are of significant interest for our understanding of the evolution of sex chromosomes and other supergene complexes.

Indexed as

Recombination, GeneticChromosomes, FungalGenes, Mating Type, FungalGenome, FungalGenomicsModels, GeneticNeurosporaPhylogenySpecies Specificity

Identifiers

PMID29074958
PMCPMC5658415
OpenAlexW2763147453

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.