Evidence map›Paper›PMID 29074854›Full record

ArticleScientific reports2017

Gag P2/NC and pol genetic diversity, polymorphism, and drug resistance mutations in HIV-1 CRF02_AG- and non-CRF02_AG-infected patients in Yaoundé, Cameroon.

Georges Teto, Claude T Tagny, Dora Mbanya, Julius Y Fonsah, Joseph Fokam, Emilienne Nchindap, Léopoldine Kenmogne, Alfred K Njamnshi, Georgette D Kanmogne

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Georges TetoDepartment of Pharmacology and Experimental Neuroscience, College of Medicine, University of Nebraska Medical Center, Omaha, NE, USA.
Claude T TagnyFaculty of Medicine and Biomedical Sciences, The University of Yaoundé I, Yaoundé, Cameroon.
Dora MbanyaFaculty of Medicine and Biomedical Sciences, The University of Yaoundé I, Yaoundé, Cameroon.
Julius Y FonsahFaculty of Medicine and Biomedical Sciences, The University of Yaoundé I, Yaoundé, Cameroon.
Joseph FokamFaculty of Medicine and Biomedical Sciences, The University of Yaoundé I, Yaoundé, Cameroon.ORCID 0000-0002-1501-2763
Emilienne NchindapYaoundé University Teaching Hospital, Yaoundé, Cameroon.
Léopoldine KenmogneYaoundé University Teaching Hospital, Yaoundé, Cameroon.
Alfred K NjamnshiFaculty of Medicine and Biomedical Sciences, The University of Yaoundé I, Yaoundé, Cameroon.
Georgette D KanmogneDepartment of Pharmacology and Experimental Neuroscience, College of Medicine, University of Nebraska Medical Center, Omaha, NE, USA. gkanmogne@unmc.edu.
Université de Yaoundé I · CMUniversity Teaching Hospital of Yaounde · CMCentre International De Reference Chantal Biya · CMNebraska Medical Center · US

Funding

HIV Genetic Diversity and Viral NeuropathogenesisR01MH094160 · NIMH · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI KANMOGNE, GEORGETTE D. · 2012 to 2016
$3.1M
NIMH NIH HHS R01 MH094160
6 · The paper itself

Abstract

In HIV-1 subtype-B, specific mutations in Gag cleavage sites (CS) are associated with treatment failure, with limited knowledge among non-B subtypes. We analyzed non-B HIV-1 gag and pol (protease/reverse-transcriptase) sequences from Cameroonians for drug resistance mutations (DRMs) in the gag P2/NC CS, and pol major DRMs. Phylogeny of the 141 sequences revealed a high genetic diversity (12 subtypes): 67.37% CRF02_AG versus 32.6% non-CRF02_AG. Overall, 7.3% transmitted and 34.3% acquired DRMs were found, including M184V, thymidine analogue mutations (T215F, D67N, K70R, K219Q), NNRTIs (L100I, Y181C, K103N, V108I, Y188L), and PIs (V82L). Twelve subjects [10 with HIV-1 CRF02_AG, 8 treatment-naïve and 4 on 3TC-AZT-NVP] showed 3 to 4 mutations in the Gag P2/NC CS: S373Q/T/A, A374T/S/G/N, T375S/A/N/G, I376V, G381S, and R380K. Subjects with or without Gag P2/NC CS mutations showed no significant difference in viral loads. Treatment-naïve subjects harboring NRTI-DRMs had significantly lower CD4 cells than those with NRTI-DRMs on ART (p = 0.042). Interestingly, two subjects had major DRMs to NRTIs, NNRTIs, and 4 mutations in the Gag P2/NC CS. In this prevailing CRF02_AG population with little exposure to PIs (~3%), mutations in the Gag P2/NC CS could increase the risk of treatment failure if there is increased use of PIs-based therapy.

Indexed as

AdolescentAdultAnti-HIV AgentsCameroonCD4-Positive T-LymphocytesCross-Sectional StudiesDrug Resistance, ViralFemalegag Gene Products, Human Immunodeficiency VirusGenetic VariationHIV-1HIV InfectionsHumansMaleMiddle AgedMutationAnti-HIV Agentsgag Gene Products, Human Immunodeficiency Viruspol Gene Products, Human Immunodeficiency Virus

Identifiers

PMID29074854
PMCPMC5658410
OpenAlexW2766514417

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.