Evidence map›Paper›PMID 29073176›Full record

ArticlePloS one2017

A nested association mapping population identifies multiple small effect QTL conferring resistance against net blotch (Pyrenophora teres f. teres) in wild barley.

Thomas Vatter, Andreas Maurer, Doris Kopahnke, Dragan Perovic, Frank Ordon, Klaus Pillen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
11.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 56 citations in OpenAlex.

  1. Haplotype-based nested association mapping for net form net blotch response in Australian barley.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  2. Article
  3. Article
  4. Article
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  6. Novel resistance loci against Pyrenophora teres f. teres map to chromosomes 3H and 6H of barley.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  7. UPLC-ESI-TOF-MS Profiling of Metabolome Alterations in Barley (Journal of agricultural and food chemistry · 2025
    Article
  8. Genetic and physical localization of a major susceptibility gene to Pyrenophora teres f. maculata in barley.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
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  15. Review
  16. Frontiers in plant science · 2021
    Review
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  20. Nested association mapping of important agronomic traits in three interspecific soybean populations.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Thomas VatterInstitute for Resistance Research and Stress Tolerance, Julius Kuehn-Institute, Federal Research Centre for Cultivated Plants, Quedlinburg, Germany.
Andreas MaurerInstitute of Agricultural and Nutritional Sciences, Chair of Plant Breeding, Martin Luther University Halle-Wittenberg, Halle, Germany.
Doris KopahnkeInstitute for Resistance Research and Stress Tolerance, Julius Kuehn-Institute, Federal Research Centre for Cultivated Plants, Quedlinburg, Germany.
Dragan PerovicInstitute for Resistance Research and Stress Tolerance, Julius Kuehn-Institute, Federal Research Centre for Cultivated Plants, Quedlinburg, Germany.
Frank OrdonInstitute for Resistance Research and Stress Tolerance, Julius Kuehn-Institute, Federal Research Centre for Cultivated Plants, Quedlinburg, Germany.
Klaus PillenInstitute of Agricultural and Nutritional Sciences, Chair of Plant Breeding, Martin Luther University Halle-Wittenberg, Halle, Germany.ORCID http://orcid.org/0000-0003-4646-6351
Julius Kühn-Institut · DEMartin Luther University Halle-Wittenberg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The net form of net blotch caused by the necrotrophic fungus Pyrenophora teres f. teres is a major disease of barley, causing high yield losses and reduced malting and feed quality. Exploiting the allelic richness of wild barley proved to be a valuable tool to broaden the genetic base of resistance of modern elite cultivars. In this study, a SNP-based nested association mapping (NAM) study was conducted to map QTL for P. teres resistance in the barley population HEB-25 comprising 1,420 lines derived from BC1S3 generation. By scoring the percentage of infected leaf area followed by calculation of the average ordinate (AO) and scoring of the reaction type (RT) in two-year field trials a large variability of net blotch resistance across and within families of HEB-25 was observed. Genotype response to net blotch infection showed a range of 48.2% for AO (0.9-49.1%) and 6.4 for RT (2.2-8.6). NAM based on 5,715 informative SNPs resulted in the identification of 24 QTL for resistance against net blotch. Out of these, six QTL are considered novel showing no correspondence to previously reported QTL for net blotch resistance. Overall, variation of net blotch resistance in HEB-25 turned out to be controlled by small effect QTL. Results indicate the presence of alleles in HEB-25 differing in their effect on net blotch resistance. Results provide valuable information regarding the genetic architecture of the complex barley-P. teres f. teres interaction as well as for the improvement of net blotch resistance of elite barley cultivars.

Indexed as

AscomycotaGenotypePolymorphism, Single NucleotideQuantitative Trait LociDisease ResistanceHordeumPlant Diseases

Identifiers

PMID29073176
PMCPMC5658061
OpenAlexW2765488500

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.