Evidence map›Paper›PMID 29071165›Full record

ArticleKDD : proceedings. International Conference on Knowledge Discovery & Data Mining2017

Federated Tensor Factorization for Computational Phenotyping.

Yejin Kim, Jimeng Sun, Hwanjo Yu, Xiaoqian Jiang

Abstract read
In one paragraph

Article in KDD : proceedings. International Conference on Knowledge Discovery & Data Mining, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Transformers and large language models in healthcare: A review.Artificial intelligence in medicine · 2024
    Review
  8. Article
  9. Article
  10. Federated Node Classification over Distributed Ego-Networks with Secure Contrastive Embedding Sharing.Proceedings of the ... ACM International Conference on Information & Knowledge Management. ACM International Conference on Information and Knowledge Management · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Federated Learning in Health care Using Structured Medical Data.Advances in kidney disease and health · 2023
    Review
  16. Review
  17. Article
  18. Communication Efficient Tensor Factorization for Decentralized Healthcare Networks.Proceedings. IEEE International Conference on Data Mining · 2021
    Article
  19. Communication Efficient Federated Generalized Tensor Factorization for Collaborative Health Data Analytics.Proceedings of the ... International World-Wide Web Conference. International WWW Conference · 2021
    Article
  20. Federated Learning for Healthcare Informatics.Journal of healthcare informatics research · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Yejin KimPohang University of Science and Technology, Pohang, Korea.
Jimeng SunGeorgia Institute of Technology, Atlanta, GA.
Hwanjo YuPohang University of Science and Technology, Pohang, Korea.
Xiaoqian JiangUniversity of California, San Diego, La Jolla, CA.

Funding

Decentralized differentially-private methods for dynamic data release and analysisR01GM118609 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JIANG, XIAOQIAN, OHNO-MACHADO, LUCILA · 2017 to 2020
$2.3M
Protect Privacy of Healthcare Data in the CloudR21LM012060 · NLM · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JIANG, XIAOQIAN · 2014 to 2015
$376k
NIGMS NIH HHS R01 GM118609NLM NIH HHS R21 LM012060
6 · The paper itself

Abstract

Tensor factorization models offer an effective approach to convert massive electronic health records into meaningful clinical concepts (phenotypes) for data analysis. These models need a large amount of diverse samples to avoid population bias. An open challenge is how to derive phenotypes jointly across multiple hospitals, in which direct patient-level data sharing is not possible (e.g., due to institutional policies). In this paper, we developed a novel solution to enable federated tensor factorization for computational phenotyping without sharing patient-level data. We developed secure data harmonization and federated computation procedures based on alternating direction method of multipliers (ADMM). Using this method, the multiple hospitals iteratively update tensors and transfer secure summarized information to a central server, and the server aggregates the information to generate phenotypes. We demonstrated with real medical datasets that our method resembles the centralized training model (based on combined datasets) in terms of accuracy and phenotypes discovery while respecting privacy.

Indexed as

ADMMFederated approachPhenotype

Identifiers

PMID29071165
PMCPMC5652331

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.