Evidence map›Paper›PMID 29070799›Full record

ArticleScientific reports2017

Controlled Self-assembly of Stem Cell Aggregates Instructs Pluripotency and Lineage Bias.

Angela W Xie, Bernard Y K Binder, Andrew S Khalil, Samantha K Schmitt, Hunter J Johnson, Nicholas A Zacharias, William L Murphy

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Potential Use of Organoids in Regenerative Medicine.Tissue engineering and regenerative medicine · 2024
    Review
  4. Article
  5. Article
  6. Article
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  8. Review
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  13. Synthetic alternatives to Matrigel.Nature reviews. Materials · 2020
    Article
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  17. Article
  18. Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Angela W XieDepartment of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, 53705, United States.ORCID 0000-0002-7564-4199
Bernard Y K BinderDepartment of Surgery, University of Wisconsin-Madison, Madison, WI, 53705, United States.
Andrew S KhalilDepartment of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, 53705, United States.
Samantha K SchmittDepartment of Materials Science and Engineering, University of Wisconsin-Madison, Madison, WI, 53705, United States.
Hunter J JohnsonDepartment of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, 53705, United States.
Nicholas A ZachariasDepartment of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, 53705, United States.
William L MurphyDepartment of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, 53705, United States. wlmurphy@wisc.edu.

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Justine Yang Bruce · 1985 to 2026
$142.6M
BIOTECHNOLOGY TRAINING PROGRAMT32GM008349 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI FOX, BRIAN G · 1989 to 2019
$22.5M
Biomaterials for local regulation of growth factor signalingR01HL093282 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI MURPHY, WILLIAM L. · 2009 to 2018
$3.3M
Vascular Surgery Research Training ProgramT32HL110853 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI MATSUMURA, JON STEVEN · 2012 to 2021
$2.6M
NCI NIH HHS P30 CA014520NHLBI NIH HHS R01 HL093282NHLBI NIH HHS T32 HL110853NIGMS NIH HHS T32 GM008349
6 · The paper itself

Abstract

Stem cell-derived organoids and other 3D microtissues offer enormous potential as models for drug screening, disease modeling, and regenerative medicine. Formation of stem/progenitor cell aggregates is common in biomanufacturing processes and critical to many organoid approaches. However, reproducibility of current protocols is limited by reliance on poorly controlled processes (e.g., spontaneous aggregation). Little is known about the effects of aggregation parameters on cell behavior, which may have implications for the production of cell aggregates and organoids. Here we introduce a bioengineered platform of labile substrate arrays that enable simple, scalable generation of cell aggregates via a controllable 2D-to-3D "self-assembly". As a proof-of-concept, we show that labile substrates generate size- and shape-controlled embryoid bodies (EBs) and can be easily modified to control EB self-assembly kinetics. We show that aggregation method instructs EB lineage bias, with faster aggregation promoting pluripotency loss and ectoderm, and slower aggregation favoring mesoderm and endoderm. We also find that aggregation kinetics of EBs markedly influence EB structure, with slower kinetics resulting in increased EB porosity and growth factor signaling. Our findings suggest that controlling internal structure of cell aggregates by modifying aggregation kinetics is a potential strategy for improving 3D microtissue models for research and translational applications.

Indexed as

Cell DifferentiationCell LineageCell Culture TechniquesCells, CulturedEmbryoid BodiesHuman Embryonic Stem CellsHumansOrganoidsPluripotent Stem CellsSignal Transduction

Identifiers

PMID29070799
PMCPMC5656593

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.