Evidence map›Paper›PMID 29070787›Full record

ArticleScientific reports2017

Transcriptomic response to thermal and salinity stress in introduced and native sympatric Palaemon caridean shrimps.

Amandine D Marie, Steve Smith, Andy J Green, Ciro Rico, Christophe Lejeusne

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Early developmental stages of native populations ofThe Journal of experimental biology · 2021
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 4 countries.

Amandine D MarieSchool of Marine Studies, Molecular Analytics Laboratory (MOANA-LAB), Faculty of Science technology and Environment, The University of South Pacific, Laucala Campus, Suva, Fiji. amsmarie8@gmail.com.ORCID 0000-0003-1212-1742
Steve SmithKonrad-Lorenz-Institue of Ethology, Department of Integrative Biology and Evolution, University of Veterinary Medicine, Vienna, Austria.ORCID 0000-0002-1318-0018
Andy J GreenEstación Biológica de Doñana, Consejo Superior de Investigaciones Científicas (EBD- CSIC), Sevilla, 41092, Spain.ORCID 0000-0002-1268-4951
Ciro RicoSchool of Marine Studies, Molecular Analytics Laboratory (MOANA-LAB), Faculty of Science technology and Environment, The University of South Pacific, Laucala Campus, Suva, Fiji. ciro.rico@usp.ac.fj.ORCID 0000-0002-0822-336X
Christophe LejeusneEstación Biológica de Doñana, Consejo Superior de Investigaciones Científicas (EBD- CSIC), Sevilla, 41092, Spain.
Consejo Superior de Investigaciones Científicas · ESCentre National de la Recherche Scientifique · FRUniversity of the South Pacific · FJUniversity of Veterinary Medicine Vienna · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Organisms develop local adaptations to cope with spatially and temporally variable environments such as estuarine habitats, where abiotic parameters such as salinity and temperature fluctuate continuously. Studying the regulation of gene expression in a variable environment allows us to understand the underlying molecular mechanisms of these adaptations and the relative roles of the genetic and plastic response. The transcriptomes of the European native Palaemon longirostris (PL) and the introduced P. macrodactylus (PM) shrimps are described and compared after an experiment simulating summer conditions in the Guadalquivir Estuary, Spain. Specimens, collected in the Guadalquivir Estuary, were maintained at a temperature and salinity of 20 °C and 5 ppt for the control, and 30 °C and 15 ppt for the stress treatment. A large amount of differential gene expression was observed: 16,013 and 2,594 for PL and PM respectively. Functionally annotated unigenes revealed some differences, with PL seemingly having to face stronger physiological stress than PM. Thus, PM seems to have greater resistance than PL under conditions of high temperature and salinity. These results constitute a step forward in the understanding of the underlying molecular mechanisms of genetic adaptation of native invertebrates, and alien taxa that have successfully invaded estuaries in temperate regions around the world.

Indexed as

Gene Expression RegulationIntroduced SpeciesSalt StressTemperatureTranscriptomeAnimalsHigh-Throughput Nucleotide SequencingPalaemonidaeSalinity

Identifiers

PMID29070787
PMCPMC5656633
OpenAlexW2766884909

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.