Evidence map›Paper›PMID 29070053›Full record

ArticleParasites & vectors2017

Distribution of Blastocystis subtypes isolated from humans from an urban community in Rio de Janeiro, Brazil.

Carolina Valença Barbosa, Rosemary de Jesus Batista, Ricardo Pereira Igreja, Claudia Masini d'Avila Levy, Heloisa Werneck de Macedo, Helena Lúcia Carneiro Santos

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 2 pooled it
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 2 syntheses or guidelines pooled it, 38 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  11. Enterobius vermicularis in Brazil: An integrative review.Revista da Sociedade Brasileira de Medicina Tropical · 2023
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  14. Identification of MultipleFrontiers in veterinary science · 2021
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  16. Determination of subtypes ofParasite epidemiology and control · 2020
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  17. A Study on the Prevalence and Subtype Diversity of the Intestinal ProtistFrontiers in cellular and infection microbiology · 2020
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  19. Characterization of subtypes ofParasite epidemiology and control · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Carolina Valença BarbosaLaboratório de Estudos Integrados em Protozoologia, Instituto Oswaldo Cruz/FIOCRUZ, Av. Brasil, 4365 Pavilhão Arthur Neiva, Rio de Janeiro, 21.045-900, Brazil.
Rosemary de Jesus BatistaDepartamento de Ginecologia e Obstetrícia, IFF/Fiocruz, Rio de Janeiro, Brasil, Av. Rui Barbosa, 716, Flamengo, Rio de Janeiro, 22250-020, Brazil.
Ricardo Pereira IgrejaDepartamento de Medicina Preventiva da Faculdade de Medicina da UFRJ , Av. Carlos Chagas Filho, 373, Edifício do Centro de Ciências da Saúde Bloco K, 2° andar, Sala 49 - Cidade Universitária - Ilha do Fundão, Rio de Janeiro, 21.941-902, Brazil.
Claudia Masini d'Avila LevyLaboratório de Estudos Integrados em Protozoologia, Instituto Oswaldo Cruz/FIOCRUZ, Av. Brasil, 4365 Pavilhão Arthur Neiva, Rio de Janeiro, 21.045-900, Brazil.
Heloisa Werneck de MacedoLaboratório de Parasitologia do Departamento de Patologia, Hospital Universitário Antônio Pedro/Universidade Federal Fluminense, Niterói, RJ, Rua Marquês do Paraná, 303. 4º andar, sala 12, Niterói, Rio de Janeiro, 24033 900, Brazil.
Helena Lúcia Carneiro SantosLaboratório de Estudos Integrados em Protozoologia, Instituto Oswaldo Cruz/FIOCRUZ, Av. Brasil, 4365 Pavilhão Arthur Neiva, Rio de Janeiro, 21.045-900, Brazil. helenalucias@ioc.fiocruz.br.
Fundação Oswaldo Cruz · BRHospital Universitário Antônio Pedro · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBlastocystis is a cosmopolitan protist parasite found in the human gastrointestinal tract and is highly prevalent in developing countries. Recent molecular studies have revealed extensive genetic diversity, which has been classified into different subtypes (STs) based on sequence analysis of small subunit ribosomal RNA gene. Blastocystis is one of the most common fecal parasites in Brazil, but the diversity of subtypes remains unknown in the country. This study aimed to determine the distribution of Blastocystis STs in an urban community in Duque de Caxias, Rio de Janeiro, Brazil.

methodsA total of 64 stool samples positive for Blastocystis in Pavlova's medium were subtyped by PCR and sequenced using primers targeting the small subunit rRNA gene, in addition to phylogenetic analysis and subtype-specific PCR using sequence-tagged-site (STS) primers.

resultsEndolimax nana (14%), Entamoeba complex (10.5%), Taenia sp. (0.6%), Trichuris trichiura (1.3%) and Enterobius vermicularis (1.3%) were detected in Blastocystis-positive samples. Of the 64 samples tested by PCR/DNA sequencing, 55 were identified as ST1 (42%), ST3 (49%), ST2 (7%) and ST4 (2%), and the presence of mixed ST (ST1 + ST3) infection was detected in nine samples (14%).

conclusionsDNA sequencing and phylogenetic analysis of Brazilian Blastocystis isolates identified four different subtypes. To our knowledge, this study provided the first genetic characterization of Blastocystis subtypes in an urban area of Rio de Janeiro, Brazil. We also identified ST4 for the first time in Brazil. Further studies are necessary to determine the distribution of STs across human populations in Rio de Janeiro.

Indexed as

Genetic VariationPhylogenyUrban PopulationAdolescentAdultAgedAged, 80 and overBlastocystisBlastocystis InfectionsBrazilChildChild, PreschoolDNA PrimersDNA, ProtozoanDNA, RibosomalFecesDNA PrimersDNA, ProtozoanDNA, RibosomalBlastocystisEpidemiologyPCRSubtypes

Identifiers

PMID29070053
PMCPMC5657060
OpenAlexW2766620802

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.