Evidence map›Paper›PMID 29068386›Full record

ReviewGenes2017

How Next-Generation Sequencing Has Aided Our Understanding of the Sequence Composition and Origin of B Chromosomes.

Alevtina Ruban, Thomas Schmutzer, Uwe Scholz, Andreas Houben

Abstract readReview
In one paragraph

Review in Genes, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. B chromosomes put the 'super' in supernumerary.Trends in genetics : TIG · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Alevtina RubanLeibniz Institute of Plant Genetics and Crop Plant Research Gatersleben, 06466 Seeland, Germany. ruban@ipk-gatersleben.de.ORCID 0000-0002-9011-6730
Thomas SchmutzerLeibniz Institute of Plant Genetics and Crop Plant Research Gatersleben, 06466 Seeland, Germany. schmutzr@ipk-gatersleben.de.
Uwe ScholzLeibniz Institute of Plant Genetics and Crop Plant Research Gatersleben, 06466 Seeland, Germany. scholz@ipk-gatersleben.de.ORCID 0000-0001-6113-3518
Andreas HoubenLeibniz Institute of Plant Genetics and Crop Plant Research Gatersleben, 06466 Seeland, Germany. houben@ipk-gatersleben.de.ORCID 0000-0003-3419-239X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accessory, supernumerary, or-most simply-B chromosomes, are found in many eukaryotic karyotypes. These small chromosomes do not follow the usual pattern of segregation, but rather are transmitted in a higher than expected frequency. As increasingly being demonstrated by next-generation sequencing (NGS), their structure comprises fragments of standard (A) chromosomes, although in some plant species, their sequence also includes contributions from organellar genomes. Transcriptomic analyses of various animal and plant species have revealed that, contrary to what used to be the common belief, some of the B chromosome DNA is protein-encoding. This review summarizes the progress in understanding B chromosome biology enabled by the application of next-generation sequencing technology and state-of-the-art bioinformatics. In particular, a contrast is drawn between a direct sequencing approach and a strategy based on a comparative genomics as alternative routes that can be taken towards the identification of B chromosome sequences.

Indexed as

B chromosomeevolutionnext generation sequencingsupernumerary chromosome

Identifiers

PMID29068386
PMCPMC5704207

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.