Evidence map›Paper›PMID 29066513›Full record

ArticleCancer research2018

Comparative Transcriptome Analysis Quantifies Immune Cell Transcript Levels, Metastatic Progression, and Survival in Osteosarcoma.

Milcah C Scott, Nuri A Temiz, Anne E Sarver, Rebecca S LaRue, Susan K Rathe, Jyotika Varshney, Natalie K Wolf, Branden S Moriarity, Timothy D O'Brien, Logan G Spector and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed
10.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 120 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article

24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Milcah C ScottMasonic Cancer Center, University of Minnesota, Minneapolis, Minnesota.
Nuri A TemizMasonic Cancer Center, University of Minnesota, Minneapolis, Minnesota.
Anne E SarverDepartment of Surgery, University of Minnesota School of Medicine, Minneapolis, Minnesota.
Rebecca S LaRueMasonic Cancer Center, University of Minnesota, Minneapolis, Minnesota.
Susan K RatheMasonic Cancer Center, University of Minnesota, Minneapolis, Minnesota.
Jyotika VarshneyMasonic Cancer Center, University of Minnesota, Minneapolis, Minnesota.
Natalie K WolfMasonic Cancer Center, University of Minnesota, Minneapolis, Minnesota.
Branden S MoriarityMasonic Cancer Center, University of Minnesota, Minneapolis, Minnesota.
Timothy D O'BrienMasonic Cancer Center, University of Minnesota, Minneapolis, Minnesota.
Logan G SpectorMasonic Cancer Center, University of Minnesota, Minneapolis, Minnesota.
David A Largaespada *Masonic Cancer Center, University of Minnesota, Minneapolis, Minnesota.
Jaime F Modiano *Masonic Cancer Center, University of Minnesota, Minneapolis, Minnesota.
Subbaya Subramanian *Masonic Cancer Center, University of Minnesota, Minneapolis, Minnesota.
Aaron L SarverMasonic Cancer Center, University of Minnesota, Minneapolis, Minnesota. sarver@umn.edu.
University of Minnesota · US

Funding

Women's CancerP30CA077598 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Jeffrey S. Miller · 1998 to 2026
$100.4M
Translational Pediatric Cancer Epidemiology Research Training GrantT32CA099936 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Logan G. Spector · 2004 to 2026
$5.1M
Sleeping Beauty for uncovering cancer genes in miceR01CA113636 · NCI · UNIVERSITY OF MINNESOTA · PI LARGAESPADA, DAVID ANDREW · 2006 to 2016
$2.5M
Bioinformatics approaches to solve the "Missing Driver" problem in solid tumorsR50CA211249 · NCI · UNIVERSITY OF MINNESOTA · PI SARVER, AARON L · 2016 to 2020
$565k
(PQ3) Modulation of Osteosarcoma Biology by Inflammation and Immunity Defined through a ComparativeApproachR21CA208529 · NCI · UNIVERSITY OF MINNESOTA · PI MODIANO, JAIME F. · 2016 to 2017
$365k
NCI NIH HHS P30 CA077598NCI NIH HHS R01 CA113636NCI NIH HHS R21 CA208529NCI NIH HHS R50 CA211249NCI NIH HHS T32 CA099936
6 · The paper itself

Abstract

Overall survival of patients with osteosarcoma (OS) has improved little in the past three decades, and better models for study are needed. OS is common in large dog breeds and is genetically inducible in mice, making the disease ideal for comparative genomic analyses across species. Understanding the level of conservation of intertumor transcriptional variation across species and how it is associated with progression to metastasis will enable us to more efficiently develop effective strategies to manage OS and to improve therapy. In this study, transcriptional profiles of OS tumors and cell lines derived from humans (

Indexed as

Gene Expression Regulation, NeoplasticTranscriptomeAnimalsBiomarkers, TumorBone NeoplasmsCase-Control StudiesDogsGene Expression ProfilingHumansImmunity, CellularMiceNeoplasm MetastasisOsteosarcomaPrognosisSurvival RateBiomarkers, Tumor

Identifiers

PMID29066513
PMCPMC5935134
OpenAlexW2766948837

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.