Evidence map›Paper›PMID 29066499›Full record

ArticleGenes & development2017

A mutually exclusive stem-loop arrangement in roX2 RNA is essential for X-chromosome regulation in

Ibrahim Avsar Ilik, Daniel Maticzka, Plamen Georgiev, Noel Marie Gutierrez, Rolf Backofen, Asifa Akhtar

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Review
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  4. N-terminus ofeLife · 2024
    Article
  5. Article
  6. Article
  7. Dosage Compensation inInternational journal of molecular sciences · 2022
    Review
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  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Ibrahim Avsar IlikMax Planck Institute of Immunobiology and Epigenetics, 79108 Freiburg im Breisgau, Germany.
Daniel MaticzkaBioinformatics Group, Department of Computer Science, University of Freiburg, 79110 Freiburg, Germany.
Plamen GeorgievMax Planck Institute of Immunobiology and Epigenetics, 79108 Freiburg im Breisgau, Germany.
Noel Marie GutierrezMax Planck Institute of Immunobiology and Epigenetics, 79108 Freiburg im Breisgau, Germany.
Rolf BackofenBioinformatics Group, Department of Computer Science, University of Freiburg, 79110 Freiburg, Germany.
Asifa AkhtarMax Planck Institute of Immunobiology and Epigenetics, 79108 Freiburg im Breisgau, Germany.
Max Planck Institute of Immunobiology and Epigenetics · DEUniversity of Freiburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The X chromosome provides an ideal model system to study the contribution of RNA-protein interactions in epigenetic regulation. In male flies, roX long noncoding RNAs (lncRNAs) harbor several redundant domains to interact with the ubiquitin ligase male-specific lethal 2 (MSL2) and the RNA helicase Maleless (MLE) for X-chromosomal regulation. However, how these interactions provide the mechanics of spreading remains unknown. By using the uvCLAP (UV cross-linking and affinity purification) methodology, which provides unprecedented information about RNA secondary structures in vivo, we identified the minimal functional unit of roX2 RNA. By using wild-type and various MLE mutant derivatives, including a catalytically inactive MLE derivative, MLE

Indexed as

AnimalsChromosomal Proteins, Non-HistoneDNA-Binding ProteinsDNA HelicasesDosage Compensation, GeneticDrosophila melanogasterDrosophila ProteinsEpigenesis, GeneticGenetic TechniquesInverted Repeat SequencesMaleMutationNuclear ProteinsProtein DomainsRNA-Binding ProteinsRNA, Long NoncodingChromosomal Proteins, Non-HistoneDNA-Binding ProteinsDNA HelicasesDrosophila Proteinsmle protein, Drosophilamsl-2 protein, DrosophilaNuclear ProteinsPabp2 protein, DrosophilaRNA-Binding ProteinsRNA, Long NoncodingTranscription Factorsacetylationdosage compensationH4K16acMLEroX RNAX chromosome

Identifiers

PMID29066499
PMCPMC5710142
OpenAlexW2765762625

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.