Evidence map›Paper›PMID 29064480›Full record

ArticleThe ISME journal2018

Bacterial SBP56 identified as a Cu-dependent methanethiol oxidase widely distributed in the biosphere.

Özge Eyice, Nataliia Myronova, Arjan Pol, Ornella Carrión, Jonathan D Todd, Tom J Smith, Stephen J Gurman, Adam Cuthbertson, Sophie Mazard, Monique Ash Mennink-Kersten and 5 more

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 81 citations in OpenAlex.

  1. Article
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  8. miR398 targets a CuBMC plant biology · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 8 institutions in 4 countries.

Özge EyiceSchool of Life Sciences, University of Warwick, Coventry, UK.
Nataliia MyronovaSchool of Life Sciences, University of Warwick, Coventry, UK.
Arjan PolDepartment of Microbiology, Institute for Water and Wetland Research, Faculty of Science, Radboud University, Nijmegen, The Netherlands.
Ornella CarriónSchool of Biological Sciences, University of East Anglia, Norwich, UK.
Jonathan D ToddSchool of Biological Sciences, University of East Anglia, Norwich, UK.
Tom J SmithDepartment of Biosciences and Chemistry, Sheffield Hallam University, Sheffield, UK.
Stephen J GurmanDepartment of Physics and Astronomy, University of Leicester, Leicester, UK.
Adam CuthbertsonSchool of Life Sciences, University of Warwick, Coventry, UK.
Sophie MazardSchool of Life Sciences, University of Warwick, Coventry, UK.
Monique Ash Mennink-KerstenDepartment of Microbiology, Institute for Water and Wetland Research, Faculty of Science, Radboud University, Nijmegen, The Netherlands.
Timothy Dh BuggDepartment of Chemistry, University of Warwick, Coventry, UK.
Karl Kristoffer AnderssonDepartment of Bioscience, University of Oslo, Oslo, Norway.
Andrew Wb JohnstonSchool of Biological Sciences, University of East Anglia, Norwich, UK.
Huub Jm Op den CampDepartment of Microbiology, Institute for Water and Wetland Research, Faculty of Science, Radboud University, Nijmegen, The Netherlands.
Hendrik SchäferSchool of Life Sciences, University of Warwick, Coventry, UK.
University of Warwick · GBRadboud University Nijmegen · NLUniversity of East Anglia · GBMacquarie University · AUOsloMet – Oslo Metropolitan University · NOQueen Mary University of London · GBSheffield Hallam University · GBUniversity of Leicester · GB

Funding

Biotechnology and Biological Sciences Research Council BB/H003851/1European Research Council 669371
6 · The paper itself

Abstract

Oxidation of methanethiol (MT) is a significant step in the sulfur cycle. MT is an intermediate of metabolism of globally significant organosulfur compounds including dimethylsulfoniopropionate (DMSP) and dimethylsulfide (DMS), which have key roles in marine carbon and sulfur cycling. In aerobic bacteria, MT is degraded by a MT oxidase (MTO). The enzymatic and genetic basis of MT oxidation have remained poorly characterized. Here, we identify for the first time the MTO enzyme and its encoding gene (mtoX) in the DMS-degrading bacterium Hyphomicrobium sp. VS. We show that MTO is a homotetrameric metalloenzyme that requires Cu for enzyme activity. MTO is predicted to be a soluble periplasmic enzyme and a member of a distinct clade of the Selenium-binding protein (SBP56) family for which no function has been reported. Genes orthologous to mtoX exist in many bacteria able to degrade DMS, other one-carbon compounds or DMSP, notably in the marine model organism Ruegeria pomeroyi DSS-3, a member of the Rhodobacteraceae family that is abundant in marine environments. Marker exchange mutagenesis of mtoX disrupted the ability of R. pomeroyi to metabolize MT confirming its function in this DMSP-degrading bacterium. In R. pomeroyi, transcription of mtoX was enhanced by DMSP, methylmercaptopropionate and MT. Rates of MT degradation increased after pre-incubation of the wild-type strain with MT. The detection of mtoX orthologs in diverse bacteria, environmental samples and its abundance in a range of metagenomic data sets point to this enzyme being widely distributed in the environment and having a key role in global sulfur cycling.

Indexed as

Bacterial ProteinsEnvironmental MicrobiologyHyphomicrobiumOxidoreductasesRhodobacteraceaeSelenium-Binding ProteinsSulfhydryl CompoundsSulfidesSulfonium CompoundsBacterial Proteinsdimethylpropiothetindimethyl sulfidemethylmercaptanOxidoreductasesSelenium-Binding ProteinsSulfhydryl CompoundsSulfidesSulfonium Compounds

Identifiers

PMID29064480
PMCPMC5739008
OpenAlexW2746648868

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.