Evidence map›Paper›PMID 29062921›Full record

ArticleSynthetic and systems biotechnology2016

Yeast knockout library allows for efficient testing of genomic mutations for cell-free protein synthesis.

Jennifer A Schoborg, Lauren G Clark, Alaksh Choudhury, C Eric Hodgman, Michael C Jewett

Open access · goldAbstract read
In one paragraph

Article in Synthetic and systems biotechnology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Review
  3. BeyondChemical reviews · 2025
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  8. Setting Up an Automated Biomanufacturing Laboratory.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  9. Article
  10. Article
  11. Development of aSynthetic biology (Oxford, England) · 2018
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jennifer A SchoborgDepartment of Chemical and Biological Engineering, Northwestern University, 2145 Sheridan Road, Evanston, IL 60208-3120, USA.
Lauren G ClarkDepartment of Chemical and Biological Engineering, Northwestern University, 2145 Sheridan Road, Evanston, IL 60208-3120, USA.
Alaksh ChoudhuryDepartment of Chemical and Biological Engineering, Northwestern University, 2145 Sheridan Road, Evanston, IL 60208-3120, USA.
C Eric HodgmanDepartment of Chemical and Biological Engineering, Northwestern University, 2145 Sheridan Road, Evanston, IL 60208-3120, USA.
Michael C JewettDepartment of Chemical and Biological Engineering, Northwestern University, 2145 Sheridan Road, Evanston, IL 60208-3120, USA.
Northwestern University · USIPM Institute of North America · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cell-free protein synthesis (CFPS) systems from crude lysates have benefitted from modifications to their enzyme composition. For example, functionally deleting enzymes in the source strain that are deleterious to CFPS can improve protein synthesis yields. However, making such modifications can take substantial time. As a proof-of-concept to accelerate prototyping capabilities, we assessed the feasibility of using the yeast knockout collection to identify negative effectors in a

Indexed as

ANOVA, analysis of varianceATP, adenosine triphosphatecAMP, cyclic adenosine monophosphateCell-free biologyCell-free protein synthesisCFPS, cell-free protein synthesisCRISPR, clustered regularly interspaced short palindromic repeatseIF, eukaryotic initiation factorIn vitro translationNTP, nucleoside triphosphateOD, optical densityProtein expressionSaccharomyces cerevisiaeSC, synthetic complete mediaSynthetic biologyYKO, yeast knockout

Identifiers

PMID29062921
PMCPMC5640588
OpenAlexW2317693875

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.