Evidence map›Paper›PMID 29062282›Full record

ArticleFrontiers in physiology2017

Model Based Targeting of IL-6-Induced Inflammatory Responses in Cultured Primary Hepatocytes to Improve Application of the JAK Inhibitor Ruxolitinib.

Svantje Sobotta, Andreas Raue, Xiaoyun Huang, Joep Vanlier, Anja Jünger, Sebastian Bohl, Ute Albrecht, Maximilian J Hahnel, Stephanie Wolf, Nikola S Mueller and 17 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in physiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 10 institutions in 2 countries.

Svantje SobottaDivision Systems Biology of Signal Transduction, German Cancer Research Center, Heidelberg, Germany.
Andreas RaueDiscovery Division, Merrimack Pharmaceuticals, Cambridge, MA, United States.
Xiaoyun HuangDivision Systems Biology of Signal Transduction, German Cancer Research Center, Heidelberg, Germany.
Joep VanlierInstitute of Physics, Albert Ludwigs University of Freiburg, Freiburg, Germany.
Anja JüngerDivision Systems Biology of Signal Transduction, German Cancer Research Center, Heidelberg, Germany.
Sebastian BohlDivision Systems Biology of Signal Transduction, German Cancer Research Center, Heidelberg, Germany.
Ute AlbrechtClinic of Gastroenterology, Hepatology and Infectious Diseases, University Hospital, Heinrich Heine University of Düsseldorf, Düsseldorf, Germany.
Maximilian J HahnelClinic of Gastroenterology, Hepatology and Infectious Diseases, University Hospital, Heinrich Heine University of Düsseldorf, Düsseldorf, Germany.
Stephanie WolfClinic of Gastroenterology, Hepatology and Infectious Diseases, University Hospital, Heinrich Heine University of Düsseldorf, Düsseldorf, Germany.
Nikola S MuellerInstitute of Computational Biology, Helmholtz Zentrum München, Neuherberg, Germany.
Lorenza A D'AlessandroDivision Systems Biology of Signal Transduction, German Cancer Research Center, Heidelberg, Germany.
Stephanie Mueller-BohlDivision Systems Biology of Signal Transduction, German Cancer Research Center, Heidelberg, Germany.
Martin E BoehmDivision Systems Biology of Signal Transduction, German Cancer Research Center, Heidelberg, Germany.
Philippe LucarelliDivision Systems Biology of Signal Transduction, German Cancer Research Center, Heidelberg, Germany.
Sandra BonefasDivision Systems Biology of Signal Transduction, German Cancer Research Center, Heidelberg, Germany.
Georg DammDepartment of Hepatobiliary Surgery and Visceral Transplantation, Leipzig University, Leipzig, Germany.
Daniel SeehoferDepartment of Hepatobiliary Surgery and Visceral Transplantation, Leipzig University, Leipzig, Germany.
Wolf D LehmannDivision Systems Biology of Signal Transduction, German Cancer Research Center, Heidelberg, Germany.
Stefan Rose-JohnInstitute of Biochemistry, University of Kiel, Kiel, Germany.
Frank van der HoevenTransgenic Service, Center for Preclinical Research, German Cancer Research Center, Heidelberg, Germany.
Norbert GretzMedical Research Center, Medical Faculty Mannheim, University of Heidelberg, Mannheim, Germany.
Fabian J TheisInstitute of Computational Biology, Helmholtz Zentrum München, Neuherberg, Germany.
Christian EhltingClinic of Gastroenterology, Hepatology and Infectious Diseases, University Hospital, Heinrich Heine University of Düsseldorf, Düsseldorf, Germany.
Johannes G BodeClinic of Gastroenterology, Hepatology and Infectious Diseases, University Hospital, Heinrich Heine University of Düsseldorf, Düsseldorf, Germany.
Jens TimmerInstitute of Physics, Albert Ludwigs University of Freiburg, Freiburg, Germany.
Marcel SchillingDivision Systems Biology of Signal Transduction, German Cancer Research Center, Heidelberg, Germany.
Ursula KlingmüllerDivision Systems Biology of Signal Transduction, German Cancer Research Center, Heidelberg, Germany.
German Cancer Research Center · DEDüsseldorf University Hospital · DEHeidelberg University · DEHelmholtz Zentrum München · DELeipzig University · DEUniversity of Freiburg · DEHeinrich Heine University Düsseldorf · DEKiel University · DEMerrimack Pharmaceuticals (United States) · USUniversity Medical Centre Mannheim · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

IL-6 is a central mediator of the immediate induction of hepatic acute phase proteins (APP) in the liver during infection and after injury, but increased IL-6 activity has been associated with multiple pathological conditions. In hepatocytes, IL-6 activates JAK1-STAT3 signaling that induces the negative feedback regulator SOCS3 and expression of APPs. While different inhibitors of IL-6-induced JAK1-STAT3-signaling have been developed, understanding their precise impact on signaling dynamics requires a systems biology approach. Here we present a mathematical model of IL-6-induced JAK1-STAT3 signaling that quantitatively links physiological IL-6 concentrations to the dynamics of IL-6-induced signal transduction and expression of target genes in hepatocytes. The mathematical model consists of coupled ordinary differential equations (ODE) and the model parameters were estimated by a maximum likelihood approach, whereas identifiability of the dynamic model parameters was ensured by the Profile Likelihood. Using model simulations coupled with experimental validation we could optimize the long-term impact of the JAK-inhibitor Ruxolitinib, a therapeutic compound that is quickly metabolized. Model-predicted doses and timing of treatments helps to improve the reduction of inflammatory APP gene expression in primary mouse hepatocytes close to levels observed during regenerative conditions. The concept of improved efficacy of the inhibitor through multiple treatments at optimized time intervals was confirmed in primary human hepatocytes. Thus, combining quantitative data generation with mathematical modeling suggests that repetitive treatment with Ruxolitinib is required to effectively target excessive inflammatory responses without exceeding doses recommended by the clinical guidelines.

Indexed as

acute phase responseIL-6mathematical modelingprimary hepatocytesruxolitinib

Identifiers

PMID29062282
PMCPMC5640784
OpenAlexW2762851762

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.