Evidence map›Paper›PMID 29061957›Full record

ArticleAnnals of transplantation2017

Negative Correlation Between Hepatitis C Virus (HCV) and Let-7 MicroRNA Family in Transplanted Livers: The Role of rs868 Single-Nucleotide Polymorphism.

Emir Ahmed Sajjad, Marek Radkowski, Agnieszka Perkowska-Ptasińska, Marek Pacholczyk, Magdalena Durlik, Mikołaj Fedorowicz, Renata Pietrzak, Bogna Ziarkiewicz-Wróblewska, Paweł Włodarski, Jacek Malejczyk

Open access · hybridAbstract read
In one paragraph

Article in Annals of transplantation, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
0.2field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. mirSNPs as Potential Colorectal Cancer Biomarkers: A Systematic Review.International journal of molecular sciences · 2024
    Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Emir Ahmed SajjadDepartment of Histology and Embryology, Centre for Biostructure Research, Medical University of Warsaw, Warsaw, Poland.
Marek RadkowskiDepartment of Immunopathology of Infectious and Parasitic Diseases, Medical University of Warsaw, Warsaw, Poland.
Agnieszka Perkowska-PtasińskaDepartment of Transplantology, Nephrology and Internal Medicine, Medical University of Warsaw, Transplantation Institute, Warsaw, Poland.
Marek PacholczykDepartment of General Surgery and Transplantology, Medical University of Warsaw, Transplantation Institute, Warsaw, Poland.
Magdalena DurlikDepartment of Transplantology, Nephrology and Internal Medicine, Medical University of Warsaw, Transplantation Institute, Warsaw, Poland.
Mikołaj FedorowiczDepartment of Histology and Embryology, Centre for Biostructure Research, Medical University of Warsaw, Warsaw, Poland.
Renata PietrzakDepartment of Histology and Embryology, Centre for Biostructure Research, Medical University of Warsaw, Warsaw, Poland.
Bogna Ziarkiewicz-WróblewskaDepartment of Pathology, Centre for Biostructure Research, Medical University of Warsaw, Warsaw, Poland.
Paweł WłodarskiDepartment of Histology and Embryology, Centre for Biostructure Research, Medical University of Warsaw, Warsaw, Poland.
Jacek MalejczykDepartment of Histology and Embryology, Centre for Biostructure Research, Medical University of Warsaw, Warsaw, Poland.
Medical University of Warsaw · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND Genetic alterations of TGF-β pathway members, including its transmembrane receptor, TGFBR1, may influence the course of HCV infection. Rs868 is a single-nucleotide polymorphism of the 3'UTR region of TGFBR1, located in a binding site for the conserved let-7/miR98 microRNA family. Previously, we demonstrated a favorable course of hepatitis C recurrence after liver transplantation in rs868 AG genotype of the transplanted liver when compared to rs868 AA. The aim of the present study was to confirm the biological effect of rs868. MATERIAL AND METHODS HepG2 cell line was transfected with luciferase vectors cloned with 3'UTR of TGFBR1 gene encompassing different rs868 alleles. Post-transplant liver biopsies from 61 patients with HCV-related end-stage liver disease were evaluated histopathologically and analyzed for the expression of TGFBR1 mRNA, let-7/miR98 microRNAs, HCV RNA load, and rs868 genotype. RESULTS Luciferase expression was significantly lower in the A allele-containing vector. TGFBR1 mRNA and HCV RNA load were correlated negatively with let-7/miR98 microRNAs and this correlation was significantly stronger for rs868 AG compared to AA genotype. A strong positive correlation was demonstrated between TGFBR1 and HCV in both genotypes. In AG heterozygotes, let-7/miR98 microRNAs showed a strong negative correlation with periportal or periseptal interface hepatitis (Ishak A score). CONCLUSIONS There is a negative correlation between let-7/miR98 microRNAs and HCV viral load and TGFBR1 mRNA after liver transplantation. In the rs868 AG heterozygotes, this correlation was stronger and there was a negative correlation between let-7/miR98 and Ishak A score, which is in concordance with the previously demonstrated protective role of this genotype in post-transplant hepatitis C recurrence.

Indexed as

Polymorphism, Single NucleotideAdultAllelesEnd Stage Liver DiseaseFemaleGenotypeHepacivirusHep G2 CellsHumansLiverLiver TransplantationMaleMicroRNAsMiddle AgedProtein Serine-Threonine KinasesReceptors, Transforming Growth Factor betaMicroRNAsmirnlet7 microRNA, humanProtein Serine-Threonine KinasesReceptors, Transforming Growth Factor betaReceptor, Transforming Growth Factor-beta Type ITGFBR1 protein, human

Identifiers

PMID29061957
PMCPMC6248281
OpenAlexW2766760230

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.