Evidence map›Paper›PMID 29061108›Full record

ArticleBMC genomics2017

Uncovering the embryonic development-related proteome and metabolome signatures in breast muscle and intramuscular fat of fast-and slow-growing chickens.

Ranran Liu, Hongyang Wang, Jie Liu, Jie Wang, Maiqing Zheng, Xiaodong Tan, Siyuan Xing, Huanxian Cui, Qinghe Li, Guiping Zhao and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
7.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 67 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Ranran LiuInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, No. 2 Yuanmingyuan W Rd, Beijing, 100193, People's Republic of China.
Hongyang WangInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, No. 2 Yuanmingyuan W Rd, Beijing, 100193, People's Republic of China.
Jie LiuInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, No. 2 Yuanmingyuan W Rd, Beijing, 100193, People's Republic of China.
Jie WangInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, No. 2 Yuanmingyuan W Rd, Beijing, 100193, People's Republic of China.
Maiqing ZhengInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, No. 2 Yuanmingyuan W Rd, Beijing, 100193, People's Republic of China.
Xiaodong TanInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, No. 2 Yuanmingyuan W Rd, Beijing, 100193, People's Republic of China.
Siyuan XingInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, No. 2 Yuanmingyuan W Rd, Beijing, 100193, People's Republic of China.
Huanxian CuiInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, No. 2 Yuanmingyuan W Rd, Beijing, 100193, People's Republic of China.
Qinghe LiInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, No. 2 Yuanmingyuan W Rd, Beijing, 100193, People's Republic of China.
Guiping ZhaoInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, No. 2 Yuanmingyuan W Rd, Beijing, 100193, People's Republic of China. zhaoguiping@caas.cn.
Jie WenInstitute of Animal Sciences, Chinese Academy of Agricultural Sciences, No. 2 Yuanmingyuan W Rd, Beijing, 100193, People's Republic of China. wenjie@caas.cn.
State Key Laboratory of Animal NutritionInstitute of Animal Sciences · CNChinese Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSkeletal muscle development is closely linked to meat production and its quality. This study is the first to quantify the proteomes and metabolomes of breast muscle in two distinct chicken breeds at embryonic day 12 (ED 12), ED 17, post-hatch D 1 and D 14 using mass spectrometry-based approaches.

resultsResults found that intramuscular fat (IMF) accumulation increased from ED 17 to D 1 and that was exactly the opposite of when most obvious growth of muscle occurred (ED 12 - ED 17 and D 1 - D 14). For slow-growing Beijing-You chickens, Ingenuity Pathway Analysis of 77-99 differential abundance (DA) proteins and 63-72 metabolites, indicated significant enrichment of molecules and pathways related to protein processing and PPAR signaling. For fast-growing Cobb chickens, analysis of 68-95 DA proteins and 56-59 metabolites demonstrated that molecules and pathways related to ATP production were significantly enriched after ED12. For IMF, several rate-limiting enzymes for beta-oxidation of fatty acid (ACADL, ACAD9, HADHA and HADHB) were identified as candidate biomarkers for IMF deposition in both breeds.

conclusionsThis study found that ED 17 - D 1 was the earliest period for IMF accumulation. Pathways related to protein processing and PPAR signaling were enriched to support high capacity of embryonic IMF accumulation in Beijing-You. Pathways related to ATP production were enriched to support the fast muscle growth in Cobb. The beta-oxidation of fatty acid is identified as the key pathway regulating chicken IMF deposition at early stages.

Indexed as

MetabolomeAdipose TissueAnimalsChickensEmbryonic DevelopmentFemaleHumansMammary Glands, AnimalMuscle DevelopmentMuscle Fibers, Fast-TwitchMuscle Fibers, Slow-TwitchProteomeProteome

Identifiers

PMID29061108
PMCPMC5653991
OpenAlexW2766333089

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.