Evidence map›Paper›PMID 29058608›Full record

ArticleBMC plant biology2017

In vivo phosphoproteome characterization reveals key starch granule-binding phosphoproteins involved in wheat water-deficit response.

Guan-Xing Chen, Shou-Min Zhen, Yan-Lin Liu, Xing Yan, Ming Zhang, Yue-Ming Yan

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 32 citations in OpenAlex.

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  15. Crop resistant starch and genetic improvement: a review of recent advances.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Guan-Xing ChenCollege of Life Science, Capital Normal University, Xisanhuan Beilu No. 105, 100048, Beijing, People's Republic of China.
Shou-Min ZhenCollege of Life Science, Capital Normal University, Xisanhuan Beilu No. 105, 100048, Beijing, People's Republic of China.
Yan-Lin LiuCollege of Life Science, Capital Normal University, Xisanhuan Beilu No. 105, 100048, Beijing, People's Republic of China.
Xing YanCollege of Life Science, Capital Normal University, Xisanhuan Beilu No. 105, 100048, Beijing, People's Republic of China.
Ming ZhangCollege of Life Science, Capital Normal University, Xisanhuan Beilu No. 105, 100048, Beijing, People's Republic of China.
Yue-Ming YanCollege of Life Science, Capital Normal University, Xisanhuan Beilu No. 105, 100048, Beijing, People's Republic of China. yanym@cnu.edu.cn.
Capital Normal University · CNYangtze University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDrought stress during grain development causes significant yield loss in cereal production. The phosphorylated modification of starch granule-binding proteins (SGBPs) is an important mechanism regulating wheat starch biosynthesis. In this study, we performed the first proteomics and phosphoproteomics analyses of SGBPs in elite Chinese bread wheat (Triticum aestivum L.) cultivar Jingdong 17 under well-watered and water-stress conditions.

resultsWater stress treatment caused significant reductions in spike grain numbers and weight, total starch and amylopectin content, and grain yield. Two-dimensional gel electrophoresis revealed that the quantity of SGBPs was reduced significantly by water-deficit treatment. Phosphoproteome characterization of SGBPs under water-deficit treatment demonstrated a reduced level of phosphorylation of main starch synthesis enzymes, particularly for granule-bound starch synthase (GBSS I), starch synthase II-a (SS II-a), and starch synthase III (SS III). Specifically, the Ser34 site of the GBSSI protein, the Tyr358 site of SS II-a, and the Ser837 site of SS III-a exhibited significant less phosphorylation under water-deficit treatment than well-watered treatment. Furthermore, the expression levels of several key genes related with starch biosynthesis detected by qRT-PCR were decreased significantly at 15 days post-anthesis under water-deficit treatment. Immunolocalization showed a clear movement of GBSS I from the periphery to the interior of starch granules during grain development, under both water-deficit and well-watered conditions.

conclusionsOur results demonstrated that the reduction in gene expression or transcription level, protein expression and phosphorylation levels of starch biosynthesis related enzymes under water-deficit conditions is responsible for the significant decrease in total starch content and grain yield.

Indexed as

DehydrationMicroscopy, Electron, ScanningPhosphoproteinsProteomeSeedsStarchTriticumPhosphoproteinsProteomeStarchBioinformaticsPhosphoproteomeStarch granule-binding proteinsTriticum aestivum L.Water-deficit

Identifiers

PMID29058608
PMCPMC5651632
OpenAlexW2765146339

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.