Evidence map›Paper›PMID 29057527›Full record

ArticleInternational journal of paediatric dentistry2018

Exploring the genomic basis of early childhood caries: a pilot study.

Jami L Ballantine, Jenna C Carlson, Andrea G Ferreira Zandoná, Cary Agler, Leslie P Zeldin, Richard Gary Rozier, Michael W Roberts, Patricia V Basta, Jason Luo, Mikafui E Antonio-Obese and 9 more

Open access · hybridAbstract read
In one paragraph

Article in International journal of paediatric dentistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 34 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Subtypes of early childhood caries predict future caries experience.Community dentistry and oral epidemiology · 2023
    Article
  5. Observational
  6. Article
  7. Article
  8. Article
  9. Article
  10. Cohort Profile: ZOE 2.0-A Community-Based Genetic Epidemiologic Study of Early Childhood Oral Health.International journal of environmental research and public health · 2020
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. The Era of the Genome and Dental Medicine.Journal of dental research · 2019
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 2 countries.

Jami L BallantineDepartment of Pediatric Dentistry, School of Dentistry, University of North Carolina-Chapel Hill, Chapel Hill, NC, USA.
Jenna C CarlsonCenter for Craniofacial and Dental Genetics, School of Dental Medicine, University of Pittsburgh, Pittsburgh, PA, USA.
Andrea G Ferreira ZandonáDepartment of Operative Dentistry, School of Dentistry, University of North Carolina-Chapel Hill, Chapel Hill, NC, USA.
Cary AglerOral and Craniofacial Health Sciences, School of Dentistry, University of North Carolina-Chapel Hill, Chapel Hill, NC, USA.
Leslie P ZeldinOral and Craniofacial Health Sciences, School of Dentistry, University of North Carolina-Chapel Hill, Chapel Hill, NC, USA.
Richard Gary RozierDepartment of Health Policy and Management, Gillings School of Global Public Health, University of North Carolina-Chapel Hill, Chapel Hill, NC, USA.
Michael W RobertsDepartment of Pediatric Dentistry, School of Dentistry, University of North Carolina-Chapel Hill, Chapel Hill, NC, USA.
Patricia V BastaDepartment of Epidemiology, Gillings School of Global Public Health, University of North Carolina-Chapel Hill, Chapel Hill, NC, USA.
Jason LuoLineberger Comprehensive Cancer Center, School of Medicine, University of North Carolina, Chapel Hill, NC, USA.
Mikafui E Antonio-ObeseOral and Craniofacial Health Sciences, School of Dentistry, University of North Carolina-Chapel Hill, Chapel Hill, NC, USA.
Daniel W McNeilDepartments of Dental Practice & Rural Health and Psychology, West Virginia University, Morgantown, WV, USA.
Robert J WeyantDepartment of Dental Public Health and Information Management, School of Dental Medicine, University of Pittsburgh, Pittsburgh, PA, USA.
Richard J CroutDepartment of Periodontics, School of Dentistry, West Virginia University, Morgantown, WV, USA.
Rebecca L SlaytonDepartment of Pediatric Dentistry, School of Dentistry, University of Washington, Seattle, WA, USA.
Steven M LevyDepartment of Preventive and Community Dentistry, University of Iowa College of Dentistry, Iowa City, IA, USA.
John R ShafferCenter for Craniofacial and Dental Genetics, School of Dental Medicine, University of Pittsburgh, Pittsburgh, PA, USA.
Mary L MarazitaCenter for Craniofacial and Dental Genetics, School of Dental Medicine, University of Pittsburgh, Pittsburgh, PA, USA.
Kari E NorthDepartment of Epidemiology, Gillings School of Global Public Health, University of North Carolina-Chapel Hill, Chapel Hill, NC, USA.
Kimon DivarisDepartment of Pediatric Dentistry, School of Dentistry, University of North Carolina-Chapel Hill, Chapel Hill, NC, USA.ORCID http://orcid.org/0000-0003-1290-7251
University of North Carolina at Chapel Hill · USUniversity of Pittsburgh · USWest Virginia University · USUniversity of Iowa · USUniversity of Washington · US

Funding

Psychosocial Influences on Rural Children's Oral HealthR01DE014899 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI FOXMAN, BETSY, MARAZITA, MARY L. · 2002 to 2020
$39.9M
UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Stephanie Engel · 2001 to 2026
$36.3M
Fluoride & Other Factors in Childhood and Adolescent Bone DevelopmentR01DE012101 · NIDCR · UNIVERSITY OF IOWA · PI LEVY, STEVEN M. · 1998 to 2013
$11.9M
Genome-Wide Association Study of Early Childhood CariesU01DE025046 · NIDCR · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DIVARIS, KIMON · 2015 to 2019
$8.4M
Prevention of Dental Caries in Early Head Start ChildrenR01DE018236 · NIDCR · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ROZIER, RICHARD GARY · 2008 to 2012
$4.9M
LONGITUDINAL STUDY OF FLUORIDE EXPOSURES &FLUORIDER01DE009551 · NIDCR · UNIVERSITY OF IOWA · PI LEVY, STEVEN M. · 1991 to 2008
$4.7M
Fluoride, Dietary, and Other Factors Related to Young Adult Bone Measures and Dental CariesR56DE012101 · NIDCR · UNIVERSITY OF IOWA · PI LEVY, STEVEN M. · 2015 to 2017
$3.5M
Dental Caries: Whole Genome Association and Gene x Environment StudiesU01DE018903 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MARAZITA, MARY L. · 2007 to 2010
$1.2M
Modeling childhood dental caries patterns for genomic and epigenetic analysisR03DE024264 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SHAFFER, JOHN R · 2015 to 2016
$462k
NIDCR NIH HHS R01 DE009551NIDCR NIH HHS R01 DE012101NIDCR NIH HHS R01 DE014899NIDCR NIH HHS R01 DE018236NIDCR NIH HHS R03 DE024264NIDCR NIH HHS R56 DE012101NIDCR NIH HHS U01 DE018903NIDCR NIH HHS U01 DE025046NIEHS NIH HHS P30 ES010126
6 · The paper itself

Abstract

objectiveA genetic component in early childhood caries (ECC) is theorized, but no genome-wide investigations of ECC have been conducted. This pilot study is part of a long-term research program aimed to: (1) determine the proportion of ECC variance attributable to the human genome and (2) identify ECC-associated genetic loci.

methodsThe study's community-based sample comprised 212 children (mean age=39 months; range = 30-52 months; males = 55%; Hispanic/Latino = 35%, African-American = 32%; American Academy of Pediatric Dentistry definition of ECC prevalence = 38%). Approximately 2.4 million single nucleotide polymorphisms (SNPs) were genotyped using DNA purified from saliva. A P < 5 × 10

resultsSNPs with minor allele frequency ≥5% explained 52% (standard error = 54%) of ECC variance (one-sided P = 0.03). Unsurprisingly, given the pilot's small sample size, no genome-wide significant associations were found. An intergenic locus on 4q32 (rs4690994) displayed the strongest association with ECC [P = 2.3 × 10

conclusionThis study's findings support a heritable component of ECC and demonstrate the feasibility of conducting genomics studies among preschool-age children.

Indexed as

Child, PreschoolDental CariesFemaleGene FrequencyGenetic Association StudiesGenetic Predisposition to DiseaseHumansMaleNorth CarolinaPilot ProjectsPolymorphism, Single NucleotidePrevalence

Identifiers

PMID29057527
PMCPMC5811369
OpenAlexW2765734308

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.