Evidence map›Paper›PMID 29056346›Full record

ArticleCell2017

Universal Patterns of Selection in Cancer and Somatic Tissues.

Iñigo Martincorena, Keiran M Raine, Moritz Gerstung, Kevin J Dawson, Kerstin Haase, Peter Van Loo, Helen Davies, Michael R Stratton, Peter J Campbell

Erratum issued Registry-linked trialAbstract read
In one paragraph

Article in Cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. It is linked to trial NCT04033965 (Tumor Mutational Patterns and Infiltrating Lymphocyte Density in Young and Old Patients With Breast Cancer), which is not on this map. Cited by 878 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
878citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04033965 completednot on this map

Tumor Mutational Patterns and Infiltrating Lymphocyte Density in Young and Old Patients With Breast Cancer

TypeobservationalSponsorHellenic Cooperative Oncology GroupRan1997 to 2010Enrolled345ConditionsBreast CancerArmsCorellation of Mutations, TILs and Age in Breast Cancer
3 · Its place in the literature

Who cites it

878 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Pervasive Somatic Mutations inbioRxiv : the preprint server for biology · 2026
    Article
  14. Ras-MAPK somatic variants in mesial temporal lobe epilepsy.Current opinion in genetics & development · 2026
    Review
  15. Clonal selection of somatic mutations shapes NK cell memory.bioRxiv : the preprint server for biology · 2026
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article

818 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Iñigo MartincorenaWellcome Trust Sanger Institute, Hinxton CB10 1SA, Cambridgeshire, UK. Electronic address: im3@sanger.ac.uk.
Keiran M RaineWellcome Trust Sanger Institute, Hinxton CB10 1SA, Cambridgeshire, UK.
Moritz GerstungEuropean Molecular Biology Laboratory, European Bioinformatics Institute EMBL-EBI, Hinxton CB10 1SD, UK.
Kevin J DawsonWellcome Trust Sanger Institute, Hinxton CB10 1SA, Cambridgeshire, UK.
Kerstin HaaseThe Francis Crick Institute, London NW1 1AT, UK.
Peter Van LooThe Francis Crick Institute, London NW1 1AT, UK; Department of Human Genetics, University of Leuven, Leuven 3000, Belgium.
Helen DaviesWellcome Trust Sanger Institute, Hinxton CB10 1SA, Cambridgeshire, UK.
Michael R StrattonWellcome Trust Sanger Institute, Hinxton CB10 1SA, Cambridgeshire, UK.
Peter J CampbellWellcome Trust Sanger Institute, Hinxton CB10 1SA, Cambridgeshire, UK; Department of Haematology, University of Cambridge, Cambridge CB2 2XY, UK. Electronic address: pc8@sanger.ac.uk.

Funding

Cancer Research UK 21777Cancer Research UK FC001202Wellcome Trust
6 · The paper itself

Abstract

Cancer develops as a result of somatic mutation and clonal selection, but quantitative measures of selection in cancer evolution are lacking. We adapted methods from molecular evolution and applied them to 7,664 tumors across 29 cancer types. Unlike species evolution, positive selection outweighs negative selection during cancer development. On average, <1 coding base substitution/tumor is lost through negative selection, with purifying selection almost absent outside homozygous loss of essential genes. This allows exome-wide enumeration of all driver coding mutations, including outside known cancer genes. On average, tumors carry ∼4 coding substitutions under positive selection, ranging from <1/tumor in thyroid and testicular cancers to >10/tumor in endometrial and colorectal cancers. Half of driver substitutions occur in yet-to-be-discovered cancer genes. With increasing mutation burden, numbers of driver mutations increase, but not linearly. We systematically catalog cancer genes and show that genes vary extensively in what proportion of mutations are drivers versus passengers.

Indexed as

HumansINDEL MutationMicrosatellite InstabilityModels, GeneticMutation RateNeoplasmsPoint MutationPolymorphism, Single NucleotideSelection, Geneticcancerevolutiongenomicsmutationsselection

Identifiers

PMID29056346
PMCPMC5720395

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.