Evidence map›Paper›PMID 29056337›Full record

ArticleCell2017

Early-Life Gene Expression in Neurons Modulates Lasting Epigenetic States.

Hume Stroud, Susan C Su, Sinisa Hrvatin, Alexander W Greben, William Renthal, Lisa D Boxer, M Aurel Nagy, Daniel R Hochbaum, Benyam Kinde, Harrison W Gabel and 1 more

Abstract read
In one paragraph

Article in Cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 130 papers.

0numbers the graph read from it
0cells of the map it votes in
130citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

130 citing papers in PubMed.

  1. Trial
  2. Altered Postnatal Chromatin Development in the Nucleus Accumbens Primes Enduring Stress Sensitivity.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2026
    Article
  3. Article
  4. Article
  5. Epigenetic regulation of brain development, plasticity, and response to early-life stress.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2026
    Review
  6. Article
  7. Laser Capture Microdissection Followed by DNA Methylation Profiling.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Chromatin modifiers in neurodevelopment.Frontiers in molecular neuroscience · 2025
    Review
  20. Review

70 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Hume StroudDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115, USA.
Susan C SuDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115, USA.
Sinisa HrvatinDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115, USA.
Alexander W GrebenDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115, USA.
William RenthalDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115, USA.
Lisa D BoxerDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115, USA.
M Aurel NagyDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115, USA.
Daniel R HochbaumDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115, USA.
Benyam KindeDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115, USA.
Harrison W GabelDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115, USA.
Michael E GreenbergDepartment of Neurobiology, Harvard Medical School, Boston, MA 02115, USA. Electronic address: michael_greenberg@hms.harvard.edu.

Funding

Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
Neuronal Activity-Dependent Regulation of MeCP2R01NS048276 · NINDS · HARVARD MEDICAL SCHOOL · PI GREENBERG, MICHAEL ELDON · 2004 to 2019
$6.9M
FUNDAMENTAL NEUROBIOLOGYT32NS007484 · NINDS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI REGEHR, WADE G · 2000 to 2014
$5.9M
Mouse Neurodevelopmental Behavior CoreU54HD090255 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI POMEROY, SCOTT LOREN · 2016 to 2020
$5.2M
CONTROL OF LONG GENE EXPRESSION AS A NOVEL THERAPEUTIC APPROACH FOR RETT SYNDROMEK08NS101064 · NINDS · HARVARD MEDICAL SCHOOL · PI RENTHAL, WILLIAM RUSSELL · 2017 to 2021
$940k
Investigating the role of MeCP2 in activity-dependent gene expressionF32NS089186 · NINDS · HARVARD MEDICAL SCHOOL · PI SU, SUSAN C · 2014 to 2015
$95k
NICHD NIH HHS U54 HD090255NIGMS NIH HHS T32 GM007753NINDS NIH HHS F32 NS089186NINDS NIH HHS K08 NS101064NINDS NIH HHS R01 NS048276NINDS NIH HHS T32 NS007484
6 · The paper itself

Abstract

In mammals, the environment plays a critical role in promoting the final steps in neuronal development during the early postnatal period. While epigenetic factors are thought to contribute to this process, the underlying molecular mechanisms remain poorly understood. Here, we show that in the brain during early life, the DNA methyltransferase DNMT3A transiently binds across transcribed regions of lowly expressed genes, and its binding specifies the pattern of DNA methylation at CA sequences (mCA) within these genes. We find that DNMT3A occupancy and mCA deposition within the transcribed regions of genes is negatively regulated by gene transcription and may be modified by early-life experience. Once deposited, mCA is bound by the methyl-DNA-binding protein MECP2 and functions in a rheostat-like manner to fine-tune the cell-type-specific transcription of genes that are critical for brain function.

Indexed as

DNA MethylationEpigenesis, GeneticAnimalsBrainDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3AGene Expression Regulation, DevelopmentalHumansMethyl-CpG-Binding Protein 2MiceNeuronsTranscriptional ActivationTranscription, GeneticDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3ADNMT3A protein, humanDnmt3a protein, mouseMECP2 protein, humanMethyl-CpG-Binding Protein 2

Identifiers

PMID29056337
PMCPMC5693680

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.