Evidence map›Paper›PMID 29056334›Full record

ArticleStem cell reports2017

Functional Antagonism between OTX2 and NANOG Specifies a Spectrum of Heterogeneous Identities in Embryonic Stem Cells.

Dario Acampora, Luca Giovanni Di Giovannantonio, Arcomaria Garofalo, Vincenzo Nigro, Daniela Omodei, Alessia Lombardi, Jingchao Zhang, Ian Chambers, Antonio Simeone

Open access · goldAbstract read
In one paragraph

Article in Stem cell reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 37 citations in OpenAlex.

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  14. N6-methyladenosine (mProceedings of the National Academy of Sciences of the United States of America · 2021
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  18. Segregation of the mouse germline and soma.Cell cycle (Georgetown, Tex.) · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Dario AcamporaInstitute of Genetics and Biophysics "Adriano Buzzati-Traverso", CNR, Via P. Castellino,111, 80131 Naples, Italy; IRCCS Neuromed, 86077 Pozzilli, IS, Italy.
Luca Giovanni Di GiovannantonioInstitute of Genetics and Biophysics "Adriano Buzzati-Traverso", CNR, Via P. Castellino,111, 80131 Naples, Italy.
Arcomaria GarofaloDipartimento di Biochimica, Biofisica e Patologia Generale, Università della Campania "Luigi Vanvitelli", Via L. De Crecchio, 7, 80138 Naples, Italy; Telethon Institute of Genetics and Medicine (TIGEM), Via Campi Flegrei, 34, 80087 Pozzuoli, NA, Italy.
Vincenzo NigroDipartimento di Biochimica, Biofisica e Patologia Generale, Università della Campania "Luigi Vanvitelli", Via L. De Crecchio, 7, 80138 Naples, Italy; Telethon Institute of Genetics and Medicine (TIGEM), Via Campi Flegrei, 34, 80087 Pozzuoli, NA, Italy.
Daniela OmodeiInstitute of Genetics and Biophysics "Adriano Buzzati-Traverso", CNR, Via P. Castellino,111, 80131 Naples, Italy.
Alessia LombardiIRCCS Neuromed, 86077 Pozzilli, IS, Italy.
Jingchao ZhangMRC Centre for Regenerative Medicine, Institute for Stem Cell Research, School of Biological Sciences, University of Edinburgh, 5 Little France Drive, Edinburgh EH16 4UU, UK.
Ian ChambersMRC Centre for Regenerative Medicine, Institute for Stem Cell Research, School of Biological Sciences, University of Edinburgh, 5 Little France Drive, Edinburgh EH16 4UU, UK.
Antonio SimeoneInstitute of Genetics and Biophysics "Adriano Buzzati-Traverso", CNR, Via P. Castellino,111, 80131 Naples, Italy; IRCCS Neuromed, 86077 Pozzilli, IS, Italy. Electronic address: antonio.simeone@igb.cnr.it.
Institute of Genetics and Biophysics · ITIstituto Neurologico Mediterraneo · ITTelethon Institute Of Genetics And Medicine · ITMRC Centre for Regenerative Medicine · GBUniversity of Edinburgh · GB

Funding

Biotechnology and Biological Sciences Research Council BB/L002736/1Medical Research Council MR/L018497/1
6 · The paper itself

Abstract

Embryonic stem cells (ESCs) cultured in leukemia inhibitory factor (LIF) plus fetal bovine serum (FBS) exhibit heterogeneity in the expression of naive and primed transcription factors. This heterogeneity reflects the dynamic condition of ESCs and their versatility to promptly respond to signaling effectors promoting naive or primed pluripotency. Here, we report that ESCs lacking Nanog or overexpressing Otx2 exhibit an early primed identity in LIF + FBS and fail to convert into 2i-induced naive state. Conversely, Otx2-null ESCs possess naive identity features in LIF + FBS similar to Nanog-overexpressing ESCs and convert poorly into FGF-induced early primed state. When both Nanog and Otx2 are inactivated, ESCs cultured in LIF + FBS exhibit primed identity and weakened ability to convert into naive state. These data suggest that, through mutual antagonism, NANOG and OTX2 specify the heterogeneous identity of ESCs cultured in LIF + FBS and individually predispose them for optimal response to naive or primed inducing factors.

Indexed as

Cell DifferentiationAnimalsCell LineCulture Media, Serum-FreeLeukemia Inhibitory FactorMiceMouse Embryonic Stem CellsNanog Homeobox ProteinOtx Transcription FactorsCulture Media, Serum-FreeLeukemia Inhibitory FactorNanog Homeobox ProteinNanog protein, mouseOtx2 protein, mouseOtx Transcription Factorsembryonic stem cell heterogeneityLIF signalingNANOGOTX2pluripotency

Identifiers

PMID29056334
PMCPMC5935799
OpenAlexW2766366829

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.