Evidence map›Paper›PMID 29056321›Full record

ArticleMolecular cell2017

CBP Regulates Recruitment and Release of Promoter-Proximal RNA Polymerase II.

Ann Boija, Dig Bijay Mahat, Aman Zare, Per-Henrik Holmqvist, Philge Philip, David J Meyers, Philip A Cole, John T Lis, Per Stenberg, Mattias Mannervik

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 96 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. bioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Ann BoijaDepartment of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, 10691 Stockholm, Sweden.
Dig Bijay MahatDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14850, USA.
Aman ZareDepartment of Molecular Biology, Umeå University, 901 87 Umeå, Sweden; Computational Life Science Cluster (CLiC), Umeå University, 901 87 Umeå, Sweden.
Per-Henrik HolmqvistDepartment of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, 10691 Stockholm, Sweden.
Philge PhilipDepartment of Molecular Biology, Umeå University, 901 87 Umeå, Sweden; Computational Life Science Cluster (CLiC), Umeå University, 901 87 Umeå, Sweden.
David J MeyersDepartment Pharmacology and Molecular Sciences, The Johns Hopkins University School of Medicine, 725 North Wolfe Street, Baltimore, MD 21205, USA.
Philip A ColeDepartment Pharmacology and Molecular Sciences, The Johns Hopkins University School of Medicine, 725 North Wolfe Street, Baltimore, MD 21205, USA.
John T LisDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14850, USA. Electronic address: johnlis@cornell.edu.
Per StenbergDepartment of Molecular Biology, Umeå University, 901 87 Umeå, Sweden; Computational Life Science Cluster (CLiC), Umeå University, 901 87 Umeå, Sweden; Division of CBRN Defence and Security, FOI, Swedish Defence Research Agency, 906 21 Umeå, Sweden. Electronic address: per.stenberg@umu.se.
Mattias MannervikDepartment of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, 10691 Stockholm, Sweden. Electronic address: mattias.mannervik@su.se.
Stockholm University · SECornell University · USJohns Hopkins University · USUmeå University · SESwedish Defence Research Agency · SE

Funding

COORDINATE GENE REGULATION IN ANIMAL CELLSR01GM025232 · NIGMS · CORNELL UNIVERSITY ITHACA · PI LIS, JOHN T · 1985 to 2020
$8.4M
Chemical Approaches to Protein PhosphorylationR01CA074305 · NCI · JOHNS HOPKINS UNIVERSITY · PI COLE, PHILIP A · 2002 to 2025
$8.0M
Protein Acylation and Methylation Mechanisms_Administrative SupplementR37GM062437 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI COLE, PHILIP A · 2013 to 2022
$4.1M
COORDINATE GENE REGULATION IN ANIMAL CELLSR37GM025232 · NIGMS · CORNELL UNIVERSITY ITHACA · PI LIS, JOHN THOMAS · 1995 to 2004
$2.5M
NCI NIH HHS R01 CA074305NIGMS NIH HHS R01 GM025232NIGMS NIH HHS R37 GM025232NIGMS NIH HHS R37 GM062437
6 · The paper itself

Abstract

Transcription activation involves RNA polymerase II (Pol II) recruitment and release from the promoter into productive elongation, but how specific chromatin regulators control these steps is unclear. Here, we identify a novel activity of the histone acetyltransferase p300/CREB-binding protein (CBP) in regulating promoter-proximal paused Pol II. We find that Drosophila CBP inhibition results in "dribbling" of Pol II from the pause site to positions further downstream but impedes transcription through the +1 nucleosome genome-wide. Promoters strongly occupied by CBP and GAGA factor have high levels of paused Pol II, a unique chromatin signature, and are highly expressed regardless of cell type. Interestingly, CBP activity is rate limiting for Pol II recruitment to these highly paused promoters through an interaction with TFIIB but for transit into elongation by histone acetylation at other genes. Thus, CBP directly stimulates both Pol II recruitment and the ability to traverse the first nucleosome, thereby promoting transcription of most genes.

Indexed as

Promoter Regions, GeneticAcetylationAnimalsCell LineChromatinChromatin Assembly and DisassemblyDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsGene Expression Regulation, DevelopmentalHistonesNucleosomesp300-CBP Transcription FactorsProtein BindingRNA Polymerase IITranscription FactorsChromatinDNA-Binding ProteinsDrosophila ProteinsHistonesnej protein, DrosophilaNucleosomesp300-CBP Transcription FactorsRNA Polymerase IITranscription FactorsTranscription Factor TFIIBTrl protein, DrosophilaCBPDrosophilaGAGA-factorhistone acetyltransferasep300polymerase pausingTFIIBtranscriptiontrithorax-like

Identifiers

PMID29056321
PMCPMC5826544
OpenAlexW2765683277

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.