Evidence map›Paper›PMID 29054530›Full record

ArticleKidney international2018

A molecular morphometric approach to diabetic kidney disease can link structure to function and outcome.

Viji Nair, Claudiu V Komorowsky, E Jennifer Weil, Berne Yee, Jeffrey Hodgin, Jennifer L Harder, Bradley Godfrey, Wenjun Ju, Carine M Boustany-Kari, Margrit Schwarz and 4 more

Open access · greenAbstract read
In one paragraph

Article in Kidney international, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 2 pooled it
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 2 syntheses or guidelines pooled it, 79 citations in OpenAlex.

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  11. Inulin andFrontiers in endocrinology · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Viji NairDivision of Nephrology, University of Michigan, Ann Arbor, Michigan, USA.
Claudiu V KomorowskyDivision of Nephrology, University of Michigan, Ann Arbor, Michigan, USA.
E Jennifer WeilNational Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Phoenix, Arizona, USA.
Berne YeeSouthwest Kidney Institute, Phoenix, Arizona, USA.
Jeffrey HodginDepartment of Pathology, University of Michigan, Ann Arbor, Michigan, USA.
Jennifer L HarderDivision of Nephrology, University of Michigan, Ann Arbor, Michigan, USA.
Bradley GodfreyDivision of Nephrology, University of Michigan, Ann Arbor, Michigan, USA.
Wenjun JuDivision of Nephrology, University of Michigan, Ann Arbor, Michigan, USA; Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, USA.
Carine M Boustany-KariCardiometabolic Diseases Research, Boehringer Ingelheim, Ridgefield, Connecticut, USA.
Margrit SchwarzCardiometabolic Diseases Research, Boehringer Ingelheim, Ridgefield, Connecticut, USA.
Kevin V LemleyDepartment of Pediatrics, University of Southern California Keck School of Medicine, Children's Hospital Los Angeles, Los Angeles, California, USA.
Peter J NelsonMedical clinic and policlinic 4, Ludwig Maximilians University, Munich, Germany.
Robert G NelsonNational Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Phoenix, Arizona, USA. Electronic address: rnelson@nih.gov.
Matthias KretzlerDivision of Nephrology, University of Michigan, Ann Arbor, Michigan, USA; Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, USA. Electronic address: kretzler@umich.edu.
University of Michigan · USBoehringer Ingelheim (United States) · USNational Institutes of Health · USLudwig-Maximilians-Universität München · DESouthwest Kidney Institute · USUniversity of Southern California · US

Funding

PUBLIC HEALTH DEMONSTRATIONP60DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MYERS, MARTIN G · 1985 to 2012
$26.5M
Regional Pilot And Feasibility Study Grants ProgramP30DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Martin G Myers · 2013 to 2026
$24.3M
Training Program in Clinical & Translationa Research in Human Glomerular DiseaseU54DK083912 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HOLZMAN, LAWRENCE B. · 2009 to 2023
$20.3M
Integrated Systems Biology Approach to Diabetic Microvascular ComplicationsR24DK082841 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ABCOUWER, STEVEN F, BROSIUS, FRANK C · 2008 to 2020
$13.1M
University of Michigan O'Brien Kidney Translational Core CenterP30DK081943 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PENNATHUR, SUBRAMANIAM · 2008 to 2022
$12.9M
Epidemiology, Pathophysiology and Treatment of Diabetic NephropathyZIADK069062 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI NELSON, ROBERT G · 2009 to 2023
$10.1M
Research BaseP30DK092926 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MARY ELLEN MICHELE HEISLER, ADESUWA B OLOMU · 2011 to 2026
$10.0M
Genesis of Epithelial Cell LumensK08DK089119 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HARDER, JENNIFER L. · 2013 to 2017
$790k
RENOPROTECTION IN TYPE 2 DIABETES MELLITUSZ01DK069062 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI NELSON, ROBERT G · 1995 to 2008
$637k
Intramural NIH HHS Z01 DK069062NIDDK NIH HHS K08 DK089119NIDDK NIH HHS P30 DK020572NIDDK NIH HHS P30 DK081943NIDDK NIH HHS P30 DK092926NIDDK NIH HHS P60 DK020572NIDDK NIH HHS R24 DK082841NIDDK NIH HHS U54 DK083912
6 · The paper itself

Abstract

Diabetic kidney disease is the leading cause of kidney failure. However, studies of molecular mechanisms of early kidney damage are lacking. Here we examined for possible linkage between transcriptional regulation and quantitative structural damage in early diabetic kidney disease in Pima Indians with type 2 diabetes. Tissue obtained from protocol kidney biopsies underwent genome-wide compartment-specific gene expression profiling and quantitative morphometric analysis. The ultrastructural lesion most strongly associated with transcriptional regulation was cortical interstitial fractional volume (VvInt), an index of tubule-interstitial damage. Transcriptional co-expression network analysis identified 1843 transcripts that correlated significantly with VvInt. These transcripts were enriched for pathways associated with mitochondrial dysfunction, inflammation, migratory mechanisms, and tubular metabolic functions. Pathway network analysis identified IL-1β as a key upstream regulator of the inflammatory response and five transcription factors cooperating with p53 to regulate metabolic functions. VvInt-associated transcripts showed significant correlation with the urine albumin to creatinine ratio and measured glomerular filtration rate 10 years after biopsy, establishing a link between the early molecular events and long-term disease progression. Thus, molecular mechanisms active early in diabetic kidney disease were revealed by correlating intrarenal transcripts with quantitative morphometry and long-term outcomes. This provides a starting point for identification of urgently needed therapeutic targets and non-invasive biomarkers of early diabetic kidney disease.

Indexed as

Transcription, GeneticAdultDiabetes Mellitus, Type 2Diabetic NephropathiesDisease ProgressionFemaleGene Expression ProfilingGene Regulatory NetworksGenetic MarkersGenetic Predisposition to DiseaseGlomerular Filtration RateHumansIndians, North AmericanKidneyMaleMiddle AgedGenetic MarkersRNA, Messengerdiabetic nephropathylongitudinal phenotypemorphogenomicspathway networkstranscriptomic profiling

Identifiers

PMID29054530
PMCPMC5794609
OpenAlexW2765976998

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.