Evidence map›Paper›PMID 29053761›Full record

ArticleInvestigative ophthalmology & visual science2017

The Transcription Factor Prdm16 Marks a Single Retinal Ganglion Cell Subtype in the Mouse Retina.

Sergio Groman-Lupa, Joseph Adewumi, Ko Uoon Park, Joseph A Brzezinski

Open access · goldAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
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  8. Genetic control of retinal ganglion cell genesis.Cellular and molecular life sciences : CMLS · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sergio Groman-LupaDepartment of Ophthalmology, University of Colorado Denver, Aurora, Colorado, United States.
Joseph AdewumiDepartment of Ophthalmology, University of Colorado Denver, Aurora, Colorado, United States.
Ko Uoon ParkDepartment of Ophthalmology, University of Colorado Denver, Aurora, Colorado, United States.
Joseph A BrzezinskiDepartment of Ophthalmology, University of Colorado Denver, Aurora, Colorado, United States.
University of Colorado Denver · US

Funding

Mechanisms of cell fate specification and competence regulation in photoreceptorsR01EY024272 · NEI · UNIVERSITY OF COLORADO DENVER · PI Joseph A Brzezinski · 2014 to 2026
$5.3M
Vision Research Training ProgramT35EY021455 · NEI · UNIVERSITY OF COLORADO DENVER · PI PETRASH, JONATHAN MARK, ROSS, RANDAL G · 2011 to 2015
$74k
NEI NIH HHS R01 EY024272NEI NIH HHS T35 EY021455
6 · The paper itself

Abstract

Purpose: Retinal ganglion cells (RGC) can be categorized into roughly 30 distinct subtypes. How these subtypes develop is poorly understood, in part because few unique subtype markers have been characterized. We tested whether the Prdm16 transcription factor is expressed by RGCs as a class or within particular ganglion cell subtypes. Methods: Embryonic and mature retinal sections and flatmount preparations were examined by immunohistochemistry for Prdm16 and several other cell type-specific markers. To visualize the morphology of Prdm16+ cells, we utilized Thy1-YFP-H transgenic mice, where a small random population of RGCs expresses yellow fluorescent protein (YFP) throughout the cytoplasm. Results: Prdm16 was expressed in the retina starting late in embryogenesis. Prdm16+ cells coexpressed the RGC marker Brn3a. These cells were arranged in an evenly spaced pattern and accounted for 2% of all ganglion cells. Prdm16+ cells coexpressed parvalbumin, but not calretinin, melanopsin, Smi32, or CART. This combination of marker expression and morphology data from Thy1-YFP-H mice suggested that the Prdm16+ cells represented a single ganglion cell subtype. Prdm16 also marked vascular endothelial cells and mural cells of retinal arterioles. Conclusions: A single subtype of ganglion cell appears to be uniquely marked by Prdm16 expression. While the precise identity of these ganglion cells is unclear, they most resemble the G9 subtype described by Völgyi and colleagues in 2009. Future studies are needed to determine the function of these ganglion cells and whether Prdm16 regulates their development.

Indexed as

AnimalsBacterial ProteinsBiomarkersDNA-Binding ProteinsFluorescent Antibody Technique, IndirectLuminescent ProteinsMiceMice, Inbred C57BLMice, TransgenicParvalbuminsRetinaRetinal Ganglion CellsTranscription Factor Brn-3ATranscription FactorsBacterial ProteinsBiomarkersDNA-Binding ProteinsLuminescent ProteinsParvalbuminsPou4f1 protein, mousePrdm16 protein, mouseTranscription Factor Brn-3ATranscription Factorsyellow fluorescent protein, Bacteria

Identifiers

PMID29053761
PMCPMC5656415
OpenAlexW2767075215

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.