Evidence map›Paper›PMID 29053026›Full record

ReviewAnnals of the American Thoracic Society2017

Application of "Omics" and Systems Biology to Sarcoidosis Research.

Elliott D Crouser, Tasha E Fingerlin, Ivana V Yang, Lisa A Maier, Patrick Nana-Sinkam, Ronald G Collman, Naftali Kaminski

Abstract readReview
In one paragraph

Review in Annals of the American Thoracic Society, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Metabolomic signaling in sarcoidosis pathogenesis.Current opinion in immunology · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Clinical Presentation and Treatment of High-Risk Sarcoidosis.Annals of the American Thoracic Society · 2021
    Review
  8. Epigenetics and sarcoidosis.European respiratory review : an official journal of the European Respiratory Society · 2021
    Review
  9. Application of Proteomics in Sarcoidosis.American journal of respiratory cell and molecular biology · 2020
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Potential immunotherapies for sarcoidosis.Expert opinion on biological therapy · 2018
    Review
  16. Review
  17. Review
  18. Genetic, Immunologic, and Environmental Basis of Sarcoidosis.Annals of the American Thoracic Society · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Elliott D Crouser1 Division of Pulmonary, Critical Care and Sleep Medicine, Ohio State University Wexner Medical Center, Columbus, Ohio.ORCID http://orcid.org/0000-0003-3197-6746
Tasha E Fingerlin2 Center for Genes Environment and Health, Department of Biomedical Research, National Jewish Health, Denver, Colorado.
Ivana V Yang3 Department of Medicine, University of Colorado School of Medicine, Aurora, Colorado.
Lisa A Maier4 Division of Occupational and Environmental Health Sciences, National Jewish Health, University of Colorado School of Medicine, Denver, Colorado.
Patrick Nana-Sinkam5 Virginia Commonwealth University, Richmond, Virginia.
Ronald G Collman6 Department of Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania; and.
Naftali Kaminski7 Pulmonary, Critical Care and Sleep Medicine, Yale School of Medicine, New Haven, Connecticut.

Funding

Genomic Analysis of Tissue and Cellular Heterogeneity in IPFR01HL127349 · NHLBI · YALE UNIVERSITY · PI BENOS, PANAGIOTIS V, KAMINSKI, NAFTALI · 2015 to 2025
$5.9M
Genetic Risk for Granulomatous Interstitial Lung DiseaseR01HL114587 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI FINGERLIN, TASHA E. · 2013 to 2018
$3.2M
Lung Transplant Microbiome and Chronic Allograft DysfunctionR01HL113252 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI BUSHMAN, FREDERIC D, CHRISTIE, JASON D · 2013 to 2016
$2.9M
Exposure in Epigenetic Regulation of Immune Response in CBDR01ES023826 · NIEHS · NATIONAL JEWISH HEALTH · PI MAIER, LISA A, YANG, IVANA V · 2015 to 2019
$2.3M
Nicotine Treatment for Pulmonary Sarcoidosis: A Clinical Trial Pilot StudyR34HL123586 · NHLBI · OHIO STATE UNIVERSITY · PI CROUSER, ELLIOTT D · 2014 to 2016
$709k
GRADS Clinical Center: Studies in Sarcoidosis and Microbiomics ResearchU01HL112712 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI COLLMAN, RONALD G, ROSSMAN, MILTON DAVID · 2012 to 2014
$469k
Sarcoidosis Health Care Disparities and Clinical Research ChallengesR13HL126399 · NHLBI · OHIO STATE UNIVERSITY · PI CROUSER, ELLIOTT D · 2014 to 2014
$10k
NHLBI NIH HHS R01 HL113252NHLBI NIH HHS R01 HL114587NHLBI NIH HHS R01 HL127349NHLBI NIH HHS R13 HL126399NHLBI NIH HHS R34 HL123586NHLBI NIH HHS U01 HL112712NIEHS NIH HHS R01 ES023826
6 · The paper itself

Abstract

Sarcoidosis is a complex, polygenic disease of unknown cause with diverse clinical phenotypes, ranging from self-limited, asymptomatic disease to life-altering symptoms and early disease-related mortality. It is unlikely that a single common environmental exposure (e.g., infection, antigen) entirely explains the disease, and numerous genetic mutations are associated with the disease. As such, it is reasonable to assume, as with other phenotypically diverse diseases, that distinct genetic mechanisms and related biological biomarkers will serve to further define sarcoidosis subphenotypes, mechanisms, and possibly etiology, thus guiding personalized care. The fields of "omics" and systems biology research are widely applied to understand polygenic and phenotypically diverse diseases, such as sarcoidosis. "Omics" refers to technologies that allow comprehensive profiling of sets of molecules in an organism. Systems biology applies advanced computational approaches to make sense of the enormous data sets that are typically generated from "omics" platforms. The primary objectives of this article are to review the available "omics" tools, assess the current status of "omics" and systems biology research in the field of sarcoidosis, and consider how this technology could be applied to advance our understanding of the mechanistic underpinnings of disease and to develop novel treatments.

Indexed as

BiomarkersSystems BiologyAnimalsBiomedical ResearchDisease Models, AnimalEpigenomicsHumansMetabolomicsMicrobiotaProteomicsSarcoidosisBiomarkersepigeneticgenomicgranulomamicrobiomeproteomic

Identifiers

PMID29053026
PMCPMC5822413

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.