Evidence map›Paper›PMID 29051971›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2018

Fine mapping of the Brassica napus Bnsdt1 gene associated with determinate growth habit.

Kaixiang Li, Yanmei Yao, Lu Xiao, Zhigang Zhao, Shaomin Guo, Zhong Fu, Dezhi Du

Abstract read
PubMed Publisher
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Construction of Shoot Apical Meristem cDNA Yeast Library ofCurrent issues in molecular biology · 2024
    Article
  4. Molecular breeding : new strategies in plant improvement · 2024
    Article
  5. Article
  6. Fine mapping of BnDM1-the gene regulating indeterminate inflorescence in Brassica napus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  7. Article
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Kaixiang LiState Key Laboratory of Plateau Ecology and Agriculture of Qinghai University, Key Laboratory of Spring Rape Genetic Improvement of Qinghai Province, Academy of Agricultural and Forestry Sciences of Qinghai University, Xining, 810016, Qinghai, China.
Yanmei YaoState Key Laboratory of Plateau Ecology and Agriculture of Qinghai University, Key Laboratory of Spring Rape Genetic Improvement of Qinghai Province, Academy of Agricultural and Forestry Sciences of Qinghai University, Xining, 810016, Qinghai, China.
Lu XiaoState Key Laboratory of Plateau Ecology and Agriculture of Qinghai University, Key Laboratory of Spring Rape Genetic Improvement of Qinghai Province, Academy of Agricultural and Forestry Sciences of Qinghai University, Xining, 810016, Qinghai, China.
Zhigang ZhaoState Key Laboratory of Plateau Ecology and Agriculture of Qinghai University, Key Laboratory of Spring Rape Genetic Improvement of Qinghai Province, Academy of Agricultural and Forestry Sciences of Qinghai University, Xining, 810016, Qinghai, China.
Shaomin GuoState Key Laboratory of Plateau Ecology and Agriculture of Qinghai University, Key Laboratory of Spring Rape Genetic Improvement of Qinghai Province, Academy of Agricultural and Forestry Sciences of Qinghai University, Xining, 810016, Qinghai, China.
Zhong FuState Key Laboratory of Plateau Ecology and Agriculture of Qinghai University, Key Laboratory of Spring Rape Genetic Improvement of Qinghai Province, Academy of Agricultural and Forestry Sciences of Qinghai University, Xining, 810016, Qinghai, China.
Dezhi DuState Key Laboratory of Plateau Ecology and Agriculture of Qinghai University, Key Laboratory of Spring Rape Genetic Improvement of Qinghai Province, Academy of Agricultural and Forestry Sciences of Qinghai University, Xining, 810016, Qinghai, China. qhurape@126.com.ORCID http://orcid.org/0000-0002-5505-0094

Funding

Key Laboratory of Spring Rape Genetic Improvement of Qinghai Province 2017-ZJ-Y09the National Key Research and Development Plan of China 2016YFD0100202the National System of Technology of the Rapeseed Industry NYCYTX-00516
6 · The paper itself

Abstract

key messageThe newly discovered determinate plant growth habit of Brassica napus is a potential trait that might contribute to the genetic improvement of rapeseed. Brassica napus is an important species of rapeseed and has an indeterminate growth habit. However, a determinate inflorescence strain (4769) has been discovered among doubled haploid (DH) lines obtained from a spring B. napus × winter B. napus cross. We assessed the effect of the determinate growth habit on agronomic traits. The results showed that determinacy is beneficial for reducing plant height and flowering time, advancing maturity and maintaining productivity. We also investigated the inheritance of determinacy. A genetic analysis revealed that the phenotype of the determinate trait is controlled by one recessive gene, Bnsdt1. Mapping of the Bnsdt1 gene was subsequently conducted in BC1 and BC3 populations derived from combination 2014 × 4769. The results showed that the Bnsdt1 gene could be delimited to a region of approximately 220 kb, between 16,627 and 16,847 kb on A10. Within the target region, whole-genome re-sequencing identified two candidate regions (16,628-16,641 and 16,739-16,794 kb) of approximately 68 kb. A Blast analysis of the two candidate intervals found that BnaA10g26300D/GSBRNA2T00136426001 (BnTFL1) is homologous to the TFL1 gene of A. thaliana. Subsequently, quantitative reverse transcription (qRT)-PCR revealed that BnTFL1 was specifically expressed in the shoot apex. Collectively, the results of expression analysis provide preliminary evidence that BnTFL1 is a candidate gene for the inflorescence trait in 4769.

Indexed as

Genes, PlantGenes, RecessiveAmino Acid SequenceArabidopsis ProteinsBrassica napusChromosome MappingGene Expression ProfilingHaploidyMembrane ProteinsMicrosatellite RepeatsPhenotypeAFL1 protein, ArabidopsisArabidopsis ProteinsMembrane Proteins

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.