Evidence map›Paper›PMID 29051489›Full record

ArticleNature communications2017

Genomic landscape associated with potential response to anti-CTLA-4 treatment in cancers.

Chan-Young Ock, Jun-Eul Hwang, Bhumsuk Keam, Sang-Bae Kim, Jae-Jun Shim, Hee-Jin Jang, Sarang Park, Bo Hwa Sohn, Minse Cha, Jaffer A Ajani and 5 more

Registry-linked trialAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04273061 (Canadian Atezolizumab Precision Targeting for Immunotherapy Intervention), which is not on this map. Cited by 96 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
96citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04273061 phase2recruitingnot on this mapstarted 2020, after this paper: background citation

Canadian Atezolizumab Precision Targeting for Immunotherapy Intervention

TypeinterventionalSponsorBritish Columbia Cancer AgencyRan2020 to 2027Enrolled200ConditionsBreast Cancer, Lung Cancer, Gastrointestinal Cancer, Genitourinary CancerArmsAtezolizumab
3 · Its place in the literature

Who cites it

96 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Trial
  3. Trial
  4. Article
  5. Single-cell and bulk transcriptome analysis reveals the impact of inflammatory microglia on prognosis and immunotherapy response in primary glioblastoma.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2026
    Article
  6. Article
  7. Interferon Epsilon Loss Is Elusive 9p21 Link to Immune-Cold Tumors, Resistant to Immune Checkpoint Therapy, and Endogenous CXCL9/10 Induction.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2025
    Review
  8. Review
  9. A Meta-Analysis on the Impact of Induction Chemotherapy on Survival Outcomes for Sinonasal Squamous Cell Carcinoma.Journal of rhinology : official journal of the Korean Rhinologic Society · 2025
    Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Breast Cancer Immunity: It is TIME for the Next Chapter.Cold Spring Harbor perspectives in medicine · 2024
    Review
  20. Review

36 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Chan-Young OckDepartment of Systems Biology, UT MD Anderson Cancer Center, Houston, TX, 77054, USA.
Jun-Eul HwangDepartment of Systems Biology, UT MD Anderson Cancer Center, Houston, TX, 77054, USA.
Bhumsuk KeamDepartment of Internal Medicine, Seoul National University Hospital, Seoul, 03080, Korea.
Sang-Bae KimDepartment of Systems Biology, UT MD Anderson Cancer Center, Houston, TX, 77054, USA.
Jae-Jun ShimDepartment of Systems Biology, UT MD Anderson Cancer Center, Houston, TX, 77054, USA.
Hee-Jin JangDepartment of Systems Biology, UT MD Anderson Cancer Center, Houston, TX, 77054, USA.ORCID http://orcid.org/0000-0001-7031-1398
Sarang ParkDepartment of Systems Biology, UT MD Anderson Cancer Center, Houston, TX, 77054, USA.
Bo Hwa SohnDepartment of Systems Biology, UT MD Anderson Cancer Center, Houston, TX, 77054, USA.
Minse ChaDepartment of Systems Biology, UT MD Anderson Cancer Center, Houston, TX, 77054, USA.
Jaffer A AjaniDepartment of Gastrointestinal Medical Oncology, UT MD Anderson Cancer Center, Houston, TX, 77054, USA.
Scott KopetzDepartment of Gastrointestinal Medical Oncology, UT MD Anderson Cancer Center, Houston, TX, 77054, USA.
Keun-Wook LeeDepartment of Internal Medicine, Seoul National University Bundang Hospital, Seongnam, 13620, Korea.
Tae Min KimDepartment of Internal Medicine, Seoul National University Hospital, Seoul, 03080, Korea.
Dae Seog HeoDepartment of Internal Medicine, Seoul National University Hospital, Seoul, 03080, Korea.
Ju-Seog LeeDepartment of Systems Biology, UT MD Anderson Cancer Center, Houston, TX, 77054, USA. jlee@mdanderson.org.

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
DEVELOPMENT AND VALIDATION OF PROGNOSTIC MODEL FOR GASTRIC CANCERR01CA150229 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI LEE, JU-SEOG · 2010 to 2013
$1.1M
NCI NIH HHS P30 CA016672NCI NIH HHS R01 CA150229
6 · The paper itself

Abstract

Immunotherapy has emerged as a promising anti-cancer treatment, however, little is known about the genetic characteristics that dictate response to immunotherapy. We develop a transcriptional predictor of immunotherapy response and assess its prediction in genomic data from ~10,000 human tissues across 30 different cancer types to estimate the potential response to immunotherapy. The integrative analysis reveals two distinct tumor types: the mutator type is positively associated with potential response to immunotherapy, whereas the chromosome-instable type is negatively associated with it. We identify somatic mutations and copy number alterations significantly associated with potential response to immunotherapy, in particular treatment with anti-CTLA-4 antibody. Our findings suggest that tumors may evolve through two different paths that would lead to marked differences in immunotherapy response as well as different strategies for evading immune surveillance. Our analysis provides resources to facilitate the discovery of predictive biomarkers for immunotherapy that could be tested in clinical trials.

Indexed as

Gene DosageAnimalsAntibodiesCTLA-4 AntigenGene ExpressionGenetic MarkersGenomicsHumansImmunotherapyMiceMutationNeoplasmsTreatment OutcomeAntibodiesCTLA-4 AntigenGenetic Markers

Identifiers

PMID29051489
PMCPMC5648801

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.