Evidence map›Paper›PMID 29049367›Full record

ArticlePloS one2017

The inner mantle of the giant clam, Tridacna squamosa, expresses a basolateral Na+/K+-ATPase α-subunit, which displays light-dependent gene and protein expression along the shell-facing epithelium.

Mel V Boo, Kum C Hiong, Celine Y L Choo, Anh H Cao-Pham, Wai P Wong, Shit F Chew, Yuen K Ip

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Mel V BooDepartment of Biological Sciences, National University of Singapore, Kent Ridge, Singapore, Republic of Singapore.
Kum C HiongDepartment of Biological Sciences, National University of Singapore, Kent Ridge, Singapore, Republic of Singapore.
Celine Y L ChooDepartment of Biological Sciences, National University of Singapore, Kent Ridge, Singapore, Republic of Singapore.
Anh H Cao-PhamDepartment of Biological Sciences, National University of Singapore, Kent Ridge, Singapore, Republic of Singapore.
Wai P WongDepartment of Biological Sciences, National University of Singapore, Kent Ridge, Singapore, Republic of Singapore.
Shit F ChewNatural Sciences and Science Education, National Institute of Education, Nanyang Technological University, Singapore, Republic of Singapore.
Yuen K IpDepartment of Biological Sciences, National University of Singapore, Kent Ridge, Singapore, Republic of Singapore.
National University of Singapore · SGNanyang Technological University · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Na+/K+-ATPase (NKA) is essential for maintaining the Na+ and K+ gradients, and supporting the secondary active transport of certain ions/molecules, across the plasma membrane of animal cells. This study aimed to clone the NKA α-subunit (NKAα) from the inner mantle adjacent to the extrapallial fluid of Tridacna squamosa, to determine its subcellular localization, and to examine the effects of light exposure on its transcript level and protein abundance. The cDNA coding sequence of NKAα from T. squamosa comprised 3105 bp, encoding 1034 amino acids with an estimated molecular mass of 114 kDa. NKAα had a basolateral localization along the shell-facing epithelium of the inner mantle. Exposure to 12 h of light led to a significantly stronger basolateral NKAα-immunofluorescence at the shell-facing epithelium, indicating that NKA might play a role in light-enhanced calcification in T. squamosa. After 3 h of light exposure, the transcript level of NKAα decreased transiently in the inner mantle, but returned to the control level thereafter. In comparison, the protein abundance of NKAα remained unchanged at hour 3, but became significantly higher than the control after 12 h of light exposure. Hence, the expression of NKAα in the inner mantle of T. squamosa was light-dependent. It is probable that a higher expression level of NKA was needed in the shell-facing epithelial cells of the inner mantle to cope with a rise in Na+ influx, possibly caused by increases in activities of some Na+-dependent ion transporters/channels involved in light-enhanced calcification.

Indexed as

LightAmino Acid SequenceAnimalsBase SequenceBivalviaBlotting, WesternDNA, ComplementaryEpitheliumMicroscopy, FluorescenceReal-Time Polymerase Chain ReactionRNA, MessengerSequence Homology, Amino AcidSodium-Potassium-Exchanging ATPaseDNA, ComplementaryRNA, MessengerSodium-Potassium-Exchanging ATPase

Identifiers

PMID29049367
PMCPMC5648256
OpenAlexW2766914998

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.