Evidence map›Paper›PMID 29046683›Full record

ArticleFrontiers in plant science2017

The Diversity of Sequence and Chromosomal Distribution of New Transposable Element-Related Segments in the Rye Genome Revealed by FISH and Lineage Annotation.

Yingxin Zhang, Chengming Fan, Shuangshuang Li, Yuhong Chen, Richard R-C Wang, Xiangqi Zhang, Fangpu Han, Zanmin Hu

Erratum issuedAbstract read
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In one paragraph

Article in Frontiers in plant science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Copy Number Variation of Transposable Elements inPlants (Basel, Switzerland) · 2019
    Article
  5. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Yingxin ZhangInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Chengming FanInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Shuangshuang LiDepartment of Life Science, Henan Normal University, Xinxiang, China.
Yuhong ChenInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Richard R-C WangForage and Range Research Laboratory, United States Department of Agriculture, Agricultural Research Service, Utah State University, Logan, UT, United States.
Xiangqi ZhangInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Fangpu HanInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Zanmin HuInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transposable elements (TEs) in plant genomes exhibit a great variety of structure, sequence content and copy number, making them important drivers for species diversity and genome evolution. Even though a genome-wide statistic summary of TEs in rye has been obtained using high-throughput DNA sequencing technology, the accurate diversity of TEs in rye, as well as their chromosomal distribution and evolution, remains elusive due to the repetitive sequence assembling problems and the high dynamic and nested nature of TEs. In this study, using genomic plasmid library construction combined with dot-blot hybridization and fluorescence

Indexed as

fluoresence in situ hybridizationnested transpositionSecale cerealeTE lineagesvariation

Identifiers

PMID29046683
PMCPMC5632726

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.