Evidence map›Paper›PMID 29046464›Full record

ArticleJournal of virology2018

Screening for Neuraminidase Inhibitor Resistance Markers among Avian Influenza Viruses of the N4, N5, N6, and N8 Neuraminidase Subtypes.

Won-Suk Choi, Ju Hwan Jeong, Jin Jung Kwon, Su Jeong Ahn, Khristine Kaith S Lloren, Hyeok-Il Kwon, Hee Bok Chae, Jungwon Hwang, Myung Hee Kim, Chul-Joong Kim and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 56 citations in OpenAlex.

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  14. Emerging HxNy Influenza A Viruses.Cold Spring Harbor perspectives in medicine · 2022
    Review
  15. Antivirals Targeting the Neuraminidase.Cold Spring Harbor perspectives in medicine · 2022
    Review
  16. Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Won-Suk ChoiCollege of Medicine and Medical Research Institute, Chungbuk National University, Cheongju, Republic of Korea.ORCID http://orcid.org/0000-0002-5120-0374
Ju Hwan JeongCollege of Medicine and Medical Research Institute, Chungbuk National University, Cheongju, Republic of Korea.
Jin Jung KwonCollege of Medicine and Medical Research Institute, Chungbuk National University, Cheongju, Republic of Korea.ORCID http://orcid.org/0000-0002-4500-1280
Su Jeong AhnCollege of Medicine and Medical Research Institute, Chungbuk National University, Cheongju, Republic of Korea.
Khristine Kaith S LlorenCollege of Medicine and Medical Research Institute, Chungbuk National University, Cheongju, Republic of Korea.
Hyeok-Il KwonCollege of Medicine and Medical Research Institute, Chungbuk National University, Cheongju, Republic of Korea.
Hee Bok ChaeCollege of Medicine and Medical Research Institute, Chungbuk National University, Cheongju, Republic of Korea.
Jungwon HwangMetabolic Regulation Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea.
Myung Hee KimMetabolic Regulation Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea.
Chul-Joong KimCollege of Veterinary Medicine, Chungnam National University, Daejeon, Republic of Korea.
Richard J WebbyDepartment of Infectious Diseases, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Elena A GovorkovaDepartment of Infectious Diseases, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Young Ki ChoiCollege of Medicine and Medical Research Institute, Chungbuk National University, Cheongju, Republic of Korea.
Yun Hee BaekCollege of Medicine and Medical Research Institute, Chungbuk National University, Cheongju, Republic of Korea microuni@chungbuk.ac.kr songminsuk@chungbuk.ac.kr.
Min-Suk SongCollege of Medicine and Medical Research Institute, Chungbuk National University, Cheongju, Republic of Korea microuni@chungbuk.ac.kr songminsuk@chungbuk.ac.kr.
Chungbuk National University · KRKorea Research Institute of Bioscience and Biotechnology · KRSt. Jude Children's Research Hospital · USChungnam National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Several subtypes of avian influenza viruses (AIVs) are emerging as novel human pathogens, and the frequency of related infections has increased in recent years. Although neuraminidase (NA) inhibitors (NAIs) are the only class of antiviral drugs available for therapeutic intervention for AIV-infected patients, studies on NAI resistance among AIVs have been limited, and markers of resistance are poorly understood. Previously, we identified unique NAI resistance substitutions in AIVs of the N3, N7, and N9 NA subtypes. Here, we report profiles of NA substitutions that confer NAI resistance in AIVs of the N4, N5, N6, and N8 NA subtypes using gene-fragmented random mutagenesis. We generated libraries of mutant influenza viruses using reverse genetics (RG) and selected resistant variants in the presence of the NAIs oseltamivir carboxylate and zanamivir in MDCK cells. In addition, two substitutions, H274Y and R292K (N2 numbering), were introduced into each NA gene for comparison. We identified 37 amino acid substitutions within the NA gene, 16 of which (4 in N4, 4 in N5, 4 in N6, and 4 in N8) conferred resistance to NAIs (oseltamivir carboxylate, zanamivir, or peramivir) as determined using a fluorescence-based NA inhibition assay. Substitutions conferring NAI resistance were mainly categorized as either novel NA subtype specific (G/N147V/I, A246V, and I427L) or previously reported in other subtypes (E119A/D/V, Q136K, E276D, R292K, and R371K). Our results demonstrate that each NA subtype possesses unique NAI resistance markers, and knowledge of these substitutions in AIVs is important in facilitating antiviral susceptibility monitoring of NAI resistance in AIVs.

Indexed as

Acids, CarbocyclicAmino Acid SubstitutionAnimalsAntiviral AgentsBirdsCyclopentanesDogsDrug Resistance, ViralEnzyme InhibitorsGuanidinesHumansInfluenza, HumanInfluenza in BirdsMadin Darby Canine Kidney CellsMutagenesisNeuraminidaseAcids, CarbocyclicAntiviral AgentsCyclopentanesEnzyme InhibitorsGuanidinesNeuraminidaseOseltamiviroseltamivir carboxylateperamivirZanamiviravian influenza virusN4N5N6N8neuraminidase inhibitorrandom mutagenesisresistance

Identifiers

PMID29046464
PMCPMC5730757
OpenAlexW2766422863

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.