Evidence map›Paper›PMID 29045870›Full record

ArticleBiophysical journal2017

Exchange of Gramicidin between Lipid Bilayers: Implications for the Mechanism of Channel Formation.

Kevin Lum, Helgi I Ingólfsson, Roger E Koeppe, Olaf S Andersen

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Kevin LumDepartment of Physiology and Biophysics, Weill Cornell Medical College, New York, New York.
Helgi I IngólfssonDepartment of Physiology and Biophysics, Weill Cornell Medical College, New York, New York.
Roger E KoeppeDepartment of Chemistry and Biochemistry, University of Arkansas, Fayetteville, Arkansas.
Olaf S AndersenDepartment of Physiology and Biophysics, Weill Cornell Medical College, New York, New York. Electronic address: sparre@med.cornell.edu.
Cornell University · USUniversity of Arkansas at Fayetteville · US

Funding

Energetics of Channel-Bilayer InteractionsR01GM021342 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI ANDERSEN, OLAF S. · 1985 to 2021
$9.9M
NIGMS NIH HHS R01 GM021342
6 · The paper itself

Abstract

The canonical mechanism of gramicidin (gA) channel formation is transmembrane dimerization of nonconducting subunits that reside in opposite bilayer leaflets. The channels do not open and close; they appear and disappear due to subunit association and dissociation. Many different types of experiments support this monomer ↔ dimer mechanism. Recently, however, this mechanism was challenged, based on experiments with lipid vesicle-incorporated gA under conditions where vesicle fusion could be controlled. In these experiments, sustained channel activity was observed long after fusion had been terminated, which led to the proposal that gA single-channel current transitions result from closed-open transitions in long-lived bilayer-spanning dimers. This proposal is at odds with 40 years of experiments, but involves the key assumption that gA monomers do not exchange between bilayers. We tested the possibility of peptide exchange between bilayers using three different types of experiments. First, we demonstrated the exchange of gA between 1,2-dierucoyl-sn-glycero-3-phosphocholine (DC

Indexed as

Bacterial ProteinsBrevibacillusElectric ConductivityGramicidinHydrophobic and Hydrophilic InteractionsLipid BilayersPhosphatidylcholinesSpectrometry, FluorescenceUnilamellar Liposomes1,2-oleoylphosphatidylcholineBacterial ProteinsGramicidinLipid BilayersPhosphatidylcholinesUnilamellar Liposomes

Identifiers

PMID29045870
PMCPMC5647621
OpenAlexW2765824185

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.