ArticleDNA research : an international journal for rapid publication of reports on genes and genomes2018
Genome structure of Rosa multiflora, a wild ancestor of cultivated roses.
Article in DNA research : an international journal for rapid publication of reports on genes and genomes, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
48 citing papers in PubMed, 105 citations in OpenAlex.
- Pangenomic analyses of rose uncover widespread structure variation and empower genomics-directed breeding.Nature genetics · 2026Article
- TPS-mediated transcription reprogramming during the robust aroma formation in Daphne odora flowers.BMC plant biology · 2026Article
- Genome-wide detection of selection signatures in roses.BMC plant biology · 2026Article
- The chromosome-scale genome assembly and annotation of Rosa bracteata (Macartney Rose).Scientific data · 2026Article
- Article
- Review
- Advancing ornamental plant breeding through genomic technologies: opportunities, challenges, and future directions.Functional & integrative genomics · 2025Review
- Unveiling the genetic basis of floral scent formation in roses using weighted gene co-expression and protein-protein interaction network analyses.Scientific reports · 2025Article
- A chromosomal-scale reference genome for Rosa hugonis.Scientific data · 2025Article
- A high-quality chromosome-scale genome assembly of the Cherokee rose (Rosa laevigata).Scientific data · 2025Article
- Development of a robust SNP marker set for genotyping diverse gene bank collections of polyploid roses.BMC plant biology · 2024Article
- Genome-Wide Analysis of the WRKY Transcription Factor Family in Roses and Their Putative Role in Defence Signalling in the Rose-Blackspot Interaction.Plants (Basel, Switzerland) · 2024Article
- Gene-flow investigation between garden and wild roses planted in close distance.Plant biotechnology (Tokyo, Japan) · 2023Article
- Designing of future ornamental crops: a biotechnological driven perspective.Horticulture research · 2023Article
- Metabolic profile and transcriptome reveal the mystery of petal blotch formation in rose.BMC plant biology · 2023Article
- GWAS of adventitious root formation in roses identifies a putative phosphoinositide phosphatase (SAC9) for marker-assisted selection.PloS one · 2023Article
- Creating novel ornamentalsFrontiers in plant science · 2023Review
- CRISPR/Cas9 System: A Potential Tool for Genetic Improvement in Floricultural Crops.Molecular biotechnology · 2022Review
- Genetic and Biochemical Aspects of Floral Scents in Roses.International journal of molecular sciences · 2022Review
- Article
Corrections and comments
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Authors and funding
7 authors at 4 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The draft genome sequence of a wild rose (Rosa multiflora Thunb.) was determined using Illumina MiSeq and HiSeq platforms. The total length of the scaffolds was 739,637,845 bp, consisting of 83,189 scaffolds, which was close to the 711 Mbp length estimated by k-mer analysis. N50 length of the scaffolds was 90,830 bp, and extent of the longest was 1,133,259 bp. The average GC content of the scaffolds was 38.9%. After gene prediction, 67,380 candidates exhibiting sequence homology to known genes and domains were extracted, which included complete and partial gene structures. This large number of genes for a diploid plant may reflect heterogeneity of the genome originating from self-incompatibility in R. multiflora. According to CEGMA analysis, 91.9% and 98.0% of the core eukaryotic genes were completely and partially conserved in the scaffolds, respectively. Genes presumably involved in flower color, scent and flowering are assigned. The results of this study will serve as a valuable resource for fundamental and applied research in the rose, including breeding and phylogenetic study of cultivated roses.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.